Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n12f
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 36 0.13
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 35 0.23
BC041691-1|AAH41691.1| 403|Homo sapiens F-box protein 22 protein. 31 2.8
BC032540-1|AAH32540.1| 403|Homo sapiens F-box protein 22 protein. 31 2.8
BC020204-1|AAH20204.2| 403|Homo sapiens Unknown (protein for MG... 31 2.8
AY005144-1|AAF89095.1| 403|Homo sapiens F-box protein FBX22p44 ... 31 2.8
AK223500-1|BAD97220.1| 403|Homo sapiens F-box only protein 22 i... 31 2.8
AK024048-1|BAB14798.1| 276|Homo sapiens protein ( Homo sapiens ... 31 2.8
AF174602-1|AAF04523.1| 81|Homo sapiens F-box protein Fbx22 pro... 31 2.8
AL109915-2|CAB89292.1| 902|Homo sapiens synaptosomal-associated... 30 4.9
AB014556-1|BAA31631.2| 912|Homo sapiens KIAA0656 protein protein. 30 4.9
AL449266-7|CAI14357.1| 761|Homo sapiens chromosome 1 open readi... 29 8.5
AL449266-6|CAI14356.1| 722|Homo sapiens chromosome 1 open readi... 29 8.5
AL449266-5|CAI14354.1| 836|Homo sapiens chromosome 1 open readi... 29 8.5
AK095517-1|BAC04565.1| 652|Homo sapiens protein ( Homo sapiens ... 29 8.5
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 35.5 bits (78), Expect = 0.13
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Frame = -2
Query: 459 LRSYLPASNAMTGTSPSIERPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGSGIV 280
L S +P+S++ + +SPS S S+ S+ S+ S +S SS SP S
Sbjct: 51 LSSSIPSSSS-SSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNS 109
Query: 279 *SSTERRSN*NGSKTGNVSDPVIMVCLKRSSIERISAS--KSRLSPSSGFSKNWIIALAP 106
SS+ S+ + S + + S P SS S+S S SPSS S + + +P
Sbjct: 110 -SSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSP 168
Query: 105 TTSFLGYAAASPRAATN 55
++S + +SP ++ +
Sbjct: 169 SSSSPSSSGSSPSSSNS 185
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 34.7 bits (76), Expect = 0.23
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Frame = -2
Query: 459 LRSYLPASNAMTGTSPSIERPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGSGIV 280
L S +P+S++ + + S SP S+ S+ S+ S +S SS SP S
Sbjct: 51 LSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSS--SSSTSSPSSSSSSSSSSPSSSNS 108
Query: 279 *SSTERRSN*NGSKTGNVSDPVIMVCLKRSSIERISAS--KSRLSPSSGFSKNWIIALAP 106
SS+ S+ + S + + S P SS S+S S SPSS S + + +P
Sbjct: 109 -SSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSP 167
Query: 105 TTSFLGYAAASPRAATN 55
++S + +SP ++ +
Sbjct: 168 SSSSPSSSGSSPSSSNS 184
>BC041691-1|AAH41691.1| 403|Homo sapiens F-box protein 22 protein.
Length = 403
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -2
Query: 390 PRSTEIISNVKELISNVLSFLTSKS 316
PRST ++SN+ E++ VL+FL +K+
Sbjct: 17 PRSTFVLSNLAEVVERVLTFLPAKA 41
>BC032540-1|AAH32540.1| 403|Homo sapiens F-box protein 22 protein.
Length = 403
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -2
Query: 390 PRSTEIISNVKELISNVLSFLTSKS 316
PRST ++SN+ E++ VL+FL +K+
Sbjct: 17 PRSTFVLSNLAEVVERVLTFLPAKA 41
>BC020204-1|AAH20204.2| 403|Homo sapiens Unknown (protein for
MGC:31799) protein.
Length = 403
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -2
Query: 390 PRSTEIISNVKELISNVLSFLTSKS 316
PRST ++SN+ E++ VL+FL +K+
Sbjct: 17 PRSTFVLSNLAEVVERVLTFLPAKA 41
>AY005144-1|AAF89095.1| 403|Homo sapiens F-box protein FBX22p44
protein.
Length = 403
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -2
Query: 390 PRSTEIISNVKELISNVLSFLTSKS 316
PRST ++SN+ E++ VL+FL +K+
Sbjct: 17 PRSTFVLSNLAEVVERVLTFLPAKA 41
>AK223500-1|BAD97220.1| 403|Homo sapiens F-box only protein 22
isoform a variant protein.
Length = 403
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -2
Query: 390 PRSTEIISNVKELISNVLSFLTSKS 316
PRST ++SN+ E++ VL+FL +K+
Sbjct: 17 PRSTFVLSNLAEVVERVLTFLPAKA 41
>AK024048-1|BAB14798.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ13986 fis, clone Y79AA1001923, weakly similar to
Homo sapiens F-box protein Fbx22 (FBX22) gene. ).
Length = 276
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -2
Query: 390 PRSTEIISNVKELISNVLSFLTSKS 316
PRST ++SN+ E++ VL+FL +K+
Sbjct: 17 PRSTFVLSNLAEVVERVLTFLPAKA 41
>AF174602-1|AAF04523.1| 81|Homo sapiens F-box protein Fbx22
protein.
Length = 81
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -2
Query: 390 PRSTEIISNVKELISNVLSFLTSKS 316
PRST ++SN+ E++ VL+FL +K+
Sbjct: 16 PRSTFVLSNLAEVVERVLTFLPAKA 40
>AL109915-2|CAB89292.1| 902|Homo sapiens synaptosomal-associated
protein, 91kDa homolog (mouse) protein.
Length = 902
Score = 30.3 bits (65), Expect = 4.9
Identities = 30/97 (30%), Positives = 44/97 (45%)
Frame = +2
Query: 26 GITNMRFVCIFVAALGLAAAYPKNDVVGANAIIQFLENPDEGESLDFEALILSMLERFRQ 205
G+ N F+ +F + L A Y ND V N + +F E +G+ D L + +RF
Sbjct: 191 GVINAAFMLLFKDLIKLFACY--NDGV-INLLEKFFEMK-KGQCKD----ALEIYKRFLT 242
Query: 206 TMITGSETLPVLDPFQLDRLSVDDQTIPLPGLRMTLE 316
M SE L V + +D+ + D T L TLE
Sbjct: 243 RMTRVSEFLKVAEQVGIDKGDIPDLTQAPSSLMETLE 279
>AB014556-1|BAA31631.2| 912|Homo sapiens KIAA0656 protein protein.
Length = 912
Score = 30.3 bits (65), Expect = 4.9
Identities = 30/97 (30%), Positives = 44/97 (45%)
Frame = +2
Query: 26 GITNMRFVCIFVAALGLAAAYPKNDVVGANAIIQFLENPDEGESLDFEALILSMLERFRQ 205
G+ N F+ +F + L A Y ND V N + +F E +G+ D L + +RF
Sbjct: 196 GVINAAFMLLFKDLIKLFACY--NDGV-INLLEKFFEMK-KGQCKD----ALEIYKRFLT 247
Query: 206 TMITGSETLPVLDPFQLDRLSVDDQTIPLPGLRMTLE 316
M SE L V + +D+ + D T L TLE
Sbjct: 248 RMTRVSEFLKVAEQVGIDKGDIPDLTQAPSSLMETLE 284
>AL449266-7|CAI14357.1| 761|Homo sapiens chromosome 1 open reading
frame 62 protein.
Length = 761
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 134 ENPDEGESLDFEALILSMLERFRQTMITGSETLPVLDPFQLDRLS 268
E EGE E L+ + E+ ++ T + +LPV P LD L+
Sbjct: 459 ERKVEGEIFKLEMLLEDVKEKMDESKYTSAPSLPVSSPVTLDDLA 503
>AL449266-6|CAI14356.1| 722|Homo sapiens chromosome 1 open reading
frame 62 protein.
Length = 722
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 134 ENPDEGESLDFEALILSMLERFRQTMITGSETLPVLDPFQLDRLS 268
E EGE E L+ + E+ ++ T + +LPV P LD L+
Sbjct: 459 ERKVEGEIFKLEMLLEDVKEKMDESKYTSAPSLPVSSPVTLDDLA 503
>AL449266-5|CAI14354.1| 836|Homo sapiens chromosome 1 open reading
frame 62 protein.
Length = 836
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 134 ENPDEGESLDFEALILSMLERFRQTMITGSETLPVLDPFQLDRLS 268
E EGE E L+ + E+ ++ T + +LPV P LD L+
Sbjct: 459 ERKVEGEIFKLEMLLEDVKEKMDESKYTSAPSLPVSSPVTLDDLA 503
>AK095517-1|BAC04565.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ38198 fis, clone FCBBF1000374. ).
Length = 652
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 134 ENPDEGESLDFEALILSMLERFRQTMITGSETLPVLDPFQLDRLS 268
E EGE E L+ + E+ ++ T + +LPV P LD L+
Sbjct: 459 ERKVEGEIFKLEMLLEDVKEKMDESKYTSAPSLPVSSPVTLDDLA 503
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,429,431
Number of Sequences: 237096
Number of extensions: 1619562
Number of successful extensions: 3402
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3399
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -