Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n12f
(565 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070987-1|AAL48609.1| 252|Drosophila melanogaster RE08075p pro... 34 0.15
AE014297-3562|AAF56308.2| 252|Drosophila melanogaster CG13618-P... 34 0.15
BT022247-1|AAY54663.1| 233|Drosophila melanogaster IP08140p pro... 33 0.27
AE014297-2913|AAF55838.1| 209|Drosophila melanogaster CG17279-P... 33 0.27
X54061-1|CAA37996.1| 1163|Drosophila melanogaster 205 K microtub... 30 2.5
L07262-1|AAA03084.1| 217|Drosophila melanogaster protein ( Dros... 30 2.5
BT003276-1|AAO25033.1| 1163|Drosophila melanogaster LD12965p pro... 30 2.5
AE014297-4842|AAN14301.1| 1185|Drosophila melanogaster CG1483-PB... 30 2.5
AE014297-4841|AAF57214.1| 1163|Drosophila melanogaster CG1483-PA... 30 2.5
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 29 3.3
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 29 3.3
AE013599-172|AAF57355.1| 217|Drosophila melanogaster CG9397-PA ... 29 4.3
>AY070987-1|AAL48609.1| 252|Drosophila melanogaster RE08075p
protein.
Length = 252
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +2
Query: 230 LPVLDPFQLDRLSVDDQTIPLPGLRMTLEDLEVRKL-STFEINSLTFDIISVLRGLFGLS 406
+P L+P + +L +D P+ LR L++++V + ST +I D+ L +
Sbjct: 65 IPPLEPLTVKKLVIDAGNAPI-NLRQALKNVKVHDMISTSKIQRYRTDLDKHL-----II 118
Query: 407 IDGEVPVIALDAGKYDLSVTALGFTIYGNGEAKIRVIRPRIKATLL 544
D I + G Y++S L I G+G+A + +I +I+ L+
Sbjct: 119 CDSRTDRIEM-IGDYEMSGRILLLPITGHGKANVTLINTKIEHRLI 163
>AE014297-3562|AAF56308.2| 252|Drosophila melanogaster CG13618-PA
protein.
Length = 252
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +2
Query: 230 LPVLDPFQLDRLSVDDQTIPLPGLRMTLEDLEVRKL-STFEINSLTFDIISVLRGLFGLS 406
+P L+P + +L +D P+ LR L++++V + ST +I D+ L +
Sbjct: 65 IPPLEPLTVKKLVIDAGNAPI-NLRQALKNVKVHDMISTSKIQRYRTDLDKHL-----II 118
Query: 407 IDGEVPVIALDAGKYDLSVTALGFTIYGNGEAKIRVIRPRIKATLL 544
D I + G Y++S L I G+G+A + +I +I+ L+
Sbjct: 119 CDSRTDRIEM-IGDYEMSGRILLLPITGHGKANVTLINTKIEHRLI 163
>BT022247-1|AAY54663.1| 233|Drosophila melanogaster IP08140p
protein.
Length = 233
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/55 (25%), Positives = 33/55 (60%)
Frame = +2
Query: 401 LSIDGEVPVIALDAGKYDLSVTALGFTIYGNGEAKIRVIRPRIKATLLIHLNIRE 565
L + G +P++ L+ G Y++ + L I+G G+AK+ + R++ + + ++R+
Sbjct: 97 LELSGWIPLLKLN-GTYEMRGSLLTMPIHGKGQAKVEIRECRVRCKVRVLEDLRD 150
>AE014297-2913|AAF55838.1| 209|Drosophila melanogaster CG17279-PA
protein.
Length = 209
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/55 (25%), Positives = 33/55 (60%)
Frame = +2
Query: 401 LSIDGEVPVIALDAGKYDLSVTALGFTIYGNGEAKIRVIRPRIKATLLIHLNIRE 565
L + G +P++ L+ G Y++ + L I+G G+AK+ + R++ + + ++R+
Sbjct: 74 LELSGWIPLLKLN-GTYEMRGSLLTMPIHGKGQAKVEIRECRVRCKVRVLEDLRD 127
>X54061-1|CAA37996.1| 1163|Drosophila melanogaster 205 K
microtubule-associated proteinprotein.
Length = 1163
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = -2
Query: 330 LTSKSSRVIRSPGSGIV*SSTERR--SN*NGSKTGNVSDPVIMVCLKRSSIERISASKSR 157
L S ++R + G+G V SST RR +N GS G+ + + R + + K +
Sbjct: 909 LVSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKV-----RPAATMTAPVKPK 963
Query: 156 -LSPSSGFSKNWIIALAPTTSFLGYAAASP 70
LSP S S + P+TS ++ SP
Sbjct: 964 VLSPRSTISSTTTVRKVPSTSTPSFSTRSP 993
>L07262-1|AAA03084.1| 217|Drosophila melanogaster protein (
Drosophila melanogastermRNA sequence, complete cds. ).
Length = 217
Score = 29.9 bits (64), Expect = 2.5
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = -2
Query: 432 AMTGTSPSIERPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGS-GIV*SSTERRS 256
A T T+ I PKSP T I+ L SN+ +K +R SP + GIV T+R
Sbjct: 83 ASTTTASPIHTPKSPPPTPPINKSPSLPSNIELKPPAKPARPFTSPSTIGIV-QGTKRGV 141
Query: 255 N*NGSKTGNVSDPVIMVCLKRSSIERISASKSRLSPSSGFSKNWIIALAPTTS 97
G + + + L RS + + A K+ + G K +A AP T+
Sbjct: 142 GGVFGGFGAQAAKLDINAL-RSQLYQ-GARKTATTSRVGVGKTTTVATAPRTT 192
>BT003276-1|AAO25033.1| 1163|Drosophila melanogaster LD12965p protein.
Length = 1163
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = -2
Query: 330 LTSKSSRVIRSPGSGIV*SSTERR--SN*NGSKTGNVSDPVIMVCLKRSSIERISASKSR 157
L S ++R + G+G V SST RR +N GS G+ + + R + + K +
Sbjct: 909 LVSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKV-----RPAATMTAPVKPK 963
Query: 156 -LSPSSGFSKNWIIALAPTTSFLGYAAASP 70
LSP S S + P+TS ++ SP
Sbjct: 964 VLSPRSTISSTTTVRKVPSTSTPSFSTRSP 993
>AE014297-4842|AAN14301.1| 1185|Drosophila melanogaster CG1483-PB,
isoform B protein.
Length = 1185
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = -2
Query: 330 LTSKSSRVIRSPGSGIV*SSTERR--SN*NGSKTGNVSDPVIMVCLKRSSIERISASKSR 157
L S ++R + G+G V SST RR +N GS G+ + + R + + K +
Sbjct: 931 LVSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKV-----RPAATMTAPVKPK 985
Query: 156 -LSPSSGFSKNWIIALAPTTSFLGYAAASP 70
LSP S S + P+TS ++ SP
Sbjct: 986 VLSPRSTISSTTTVRKVPSTSTPSFSTRSP 1015
>AE014297-4841|AAF57214.1| 1163|Drosophila melanogaster CG1483-PA,
isoform A protein.
Length = 1163
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = -2
Query: 330 LTSKSSRVIRSPGSGIV*SSTERR--SN*NGSKTGNVSDPVIMVCLKRSSIERISASKSR 157
L S ++R + G+G V SST RR +N GS G+ + + R + + K +
Sbjct: 909 LVSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKV-----RPAATMTAPVKPK 963
Query: 156 -LSPSSGFSKNWIIALAPTTSFLGYAAASP 70
LSP S S + P+TS ++ SP
Sbjct: 964 VLSPRSTISSTTTVRKVPSTSTPSFSTRSP 993
>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p protein.
Length = 1872
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/112 (25%), Positives = 46/112 (41%)
Frame = -2
Query: 423 GTSPSIERPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGSGIV*SSTERRSN*NG 244
G S S R R + + + S L SSR RS SS SN G
Sbjct: 890 GDSRSASRGPPSRPGSRLDQIGSRMDRPNSRLERSSSRAERSSSRADRPSSRFDVSNSRG 949
Query: 243 SKTGNVSDPVIMVCLKRSSIERISASKSRLSPSSGFSKNWIIALAPTTSFLG 88
+ N + L+ SSI + +++R ++ S+ I+L+P ++ +G
Sbjct: 950 NSPANSRLSINSSSLRSSSISPATMARNRSMRATTPSRRKSISLSPASAMMG 1001
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/112 (25%), Positives = 46/112 (41%)
Frame = -2
Query: 423 GTSPSIERPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGSGIV*SSTERRSN*NG 244
G S S R R + + + S L SSR RS SS SN G
Sbjct: 888 GDSRSASRGPPSRPGSRLDQIGSRMDRPNSRLERSSSRAERSSSRADRPSSRFDVSNSRG 947
Query: 243 SKTGNVSDPVIMVCLKRSSIERISASKSRLSPSSGFSKNWIIALAPTTSFLG 88
+ N + L+ SSI + +++R ++ S+ I+L+P ++ +G
Sbjct: 948 NSRANSRLSINSSSLRSSSISPATMARNRSMRATTPSRRKSISLSPASAMMG 999
>AE013599-172|AAF57355.1| 217|Drosophila melanogaster CG9397-PA
protein.
Length = 217
Score = 29.1 bits (62), Expect = 4.3
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = -2
Query: 432 AMTGTSPSIERPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGS-GIV*SSTERRS 256
A T T+ I PKSP T I+ L SN+ +K +R SP + GIV T+R
Sbjct: 83 ASTTTASPILTPKSPPPTPPINKSPSLSSNIELKPPAKPARPFTSPSTIGIV-QGTKRGV 141
Query: 255 N*NGSKTGNVSDPVIMVCLKRSSIERISASKSRLSPSSGFSKNWIIALAPTTS 97
G + + + L RS + + A K+ + G K +A AP T+
Sbjct: 142 GGVFGGFGAQAAKLDINAL-RSQLYQ-GARKTATTSRVGVGKTTTVATAPRTT 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,027,114
Number of Sequences: 53049
Number of extensions: 505245
Number of successful extensions: 1743
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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