Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n09r
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 39 0.004
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 37 0.017
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 32 0.48
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 30 1.9
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 28 5.9
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 28 5.9
AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical ... 28 5.9
AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical ... 28 5.9
Z69718-4|CAA93537.1| 147|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF125443-1|AAD12801.1| 783|Caenorhabditis elegans Hypothetical ... 28 7.8
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 38.7 bits (86), Expect = 0.004
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
Frame = -1
Query: 614 QCAGAVLTNFHILSVATCFSGAFYRPDTRRIRLGSDIRNEGGLIVNVLLANNHHSFDPTN 435
+C G+++ +L+ A CF+ RP + +R+G R+ G V + H ++
Sbjct: 83 RCGGSLIDPNFVLTAAHCFAKD-RRPTSYSVRVGGH-RSGSGSPHRVTAVSIHPWYNIGF 140
Query: 434 MAS-DISVVRLSSAITLGGNIQQASVILQGVH-VPPRLSVELIGWGNTPQGGAVTDDNLY 261
+S D +++R+ + + + L + V RL V + GWG+T +G +++ L
Sbjct: 141 PSSYDFAIMRIHPPVNTSTTARP--ICLPSLPAVENRLCV-VTGWGSTIEGSSLSAPTLR 197
Query: 260 GLSLTTVDRYTCRS--KYEDREVTNTMLCFGLPREGGRDFFTRDVGAPVFYQN----ALI 99
+ + + C S Y R +MLC G G D D G P+ L
Sbjct: 198 EIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGY-SYGKIDSCQGDSGGPLMCARDGHWELT 256
Query: 98 SLISFGESDANNEYPLVGTGISDYTNWI 15
++S+G A P V + + WI
Sbjct: 257 GVVSWGIGCARPGMPGVYGNVHSASTWI 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 36.7 bits (81), Expect = 0.017
Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Frame = -1
Query: 611 CAGAVLTNFHILSVATCFSGAFYRPDTRRIRLG--SDIRNEGGLIVNVLLANNHHSFDPT 438
C ++L H+++ A CF R + + +G + + +G + L + +
Sbjct: 54 CGASILDKTHLITAAHCFE-EDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYKD 112
Query: 437 NMASDISVVRLS-SAITLGGNIQQASVILQG-VHVPPRLSVELIGWGNTPQGGAVTDDNL 264
+ DI+++ + I Q + + V+ P R V + GWG+ G + L
Sbjct: 113 IFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCV-VSGWGSM---GLRYAERL 168
Query: 263 YGLSLTTVDRYTC-RSKYEDREVTNTMLCFGLPREGGRDFFTRDVGAPVFYQN-----AL 102
+ ++R+ C S ++ + C G EGG D D G P + L
Sbjct: 169 QAALIPIINRFDCVNSSQIYSSMSRSAFCAGY-LEGGIDSCQGDSGGPFACRREDGAFVL 227
Query: 101 ISLISFGESDANNEYPLVGTGISDYTNWI 15
+IS+G+ A + P + T ++ Y +WI
Sbjct: 228 AGVISWGDGCAQKKQPGIYTMVAPYLSWI 256
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = -1
Query: 467 ANNHHSFDPTNMASDISVVRLSSAITLGGNIQQASVILQGVHVPPRLSVELIGWGNTPQG 288
AN P D ++V L +T N+Q V +LS+E G+G P
Sbjct: 274 ANRTKKIPPQYYTDDFAIVHLYEELTFSSNVQSVCVADDETQPNDKLSLEYFGFGLNPP- 332
Query: 287 GAVTDDNLYGLSLTTVDRY 231
+D N G+ T RY
Sbjct: 333 ---SDINQNGVDNTGQLRY 348
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +3
Query: 492 AFISYVRTETNTTSIG-PVEGSRETSGNRQDMEVGEYGTSTLLDPNVAQGDFNLSQ---- 656
+F S T TN + G P G + T+G + + S+ +DPN+ Q + Q
Sbjct: 703 SFQSTTPTTTNNFNNGQPSTGFQSTTGMPTTNDQSGFIASSTMDPNMPQAQYPSQQEIMT 762
Query: 657 -TGAVTDRHSSAKVV 698
TG +D+ +SA +V
Sbjct: 763 ATGQQSDQSNSANMV 777
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +3
Query: 492 AFISYVRTETNTTSIG-PVEGSRETSGNRQDMEVGEYGTSTLLDPNVAQGDFNLSQ---- 656
+F S T TN + G P G + T+G + + S+ +DPN+ Q + Q
Sbjct: 698 SFQSTTPTTTNNFNNGQPSTGFQSTTGMPTTNDQSGFIASSTMDPNMPQAQYPSQQEIMT 757
Query: 657 -TGAVTDRHSSAKVV 698
TG +D+ +SA +V
Sbjct: 758 ATGQQSDQSNSANMV 772
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +3
Query: 492 AFISYVRTETNTTSIG-PVEGSRETSGNRQDMEVGEYGTSTLLDPNVAQGDFNLSQ---- 656
+F S T TN + G P G + T+G + + S+ +DPN+ Q + Q
Sbjct: 721 SFQSTTPTTTNNFNNGQPSTGFQSTTGMPTTNDQSGFIASSTMDPNMPQAQYPSQQEIMT 780
Query: 657 -TGAVTDRHSSAKVV 698
TG +D+ +SA +V
Sbjct: 781 ATGQQSDQSNSANMV 795
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 204 PVFVFAPTGVSVYCGEAQTV*VIVGNCTSLRSV 302
PV V TG+ +Y G + +GNC++ RS+
Sbjct: 1008 PVHVRVHTGLPIYNGHTYSTSTCLGNCSNRRSL 1040
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 204 PVFVFAPTGVSVYCGEAQTV*VIVGNCTSLRSV 302
PV V TG+ +Y G + +GNC++ RS+
Sbjct: 1008 PVHVRVHTGLPIYNGHTYSTSTCLGNCSNRRSL 1040
>AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical
protein H20J18.1b protein.
Length = 909
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 374 QQASVILQGVHVPPRLSVELIGWGNTPQGGAVTDDN 267
Q A+ I + + PP S LI N P GG V + N
Sbjct: 365 QPATSIQESLSAPPGASPNLIALVNQPNGGQVPNQN 400
>AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical
protein H20J18.1a protein.
Length = 947
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 374 QQASVILQGVHVPPRLSVELIGWGNTPQGGAVTDDN 267
Q A+ I + + PP S LI N P GG V + N
Sbjct: 365 QPATSIQESLSAPPGASPNLIALVNQPNGGQVPNQN 400
>Z69718-4|CAA93537.1| 147|Caenorhabditis elegans Hypothetical
protein W06D11.5 protein.
Length = 147
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 713 SCISANNLGTRVPISDRPSLAQVEVALGNVWIQQCAGAVLTNFHIL 576
SC+S + DR L +V + + N W+Q+ T FH+L
Sbjct: 52 SCLSRRESFVLQEVKDRQMLLKVGLKICNEWLQEGNSNRPTPFHLL 97
>AF125443-1|AAD12801.1| 783|Caenorhabditis elegans Hypothetical
protein H32C10.3 protein.
Length = 783
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -3
Query: 495 RRLDRECVTCQ*PSLIRSHEYGQRYFRCPS*FSNH-PW 385
+++DR C TC P SH Q +C F +H PW
Sbjct: 537 KQIDRYCFTCWIPKTSSSHHCSQ-CDKCVDGFDHHCPW 573
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,877,740
Number of Sequences: 27780
Number of extensions: 414411
Number of successful extensions: 1076
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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