Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n08r
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   0.76 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    25   0.76 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.1  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 419 KLLFSNNFNLFEIVFSGYYFIFV 487
           +LL S   +LF+++F  YY  +V
Sbjct: 254 QLLVSIGVSLFDVLFQAYYLYYV 276


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 419 KLLFSNNFNLFEIVFSGYYFIFV 487
           +LL S   +LF+++F  YY  +V
Sbjct: 254 QLLVSIGVSLFDVLFQAYYLYYV 276


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 170 IKL*LLLCMFLMEYIHLFXIL*PSFVLF 87
           + L LL+C++   Y+HL      +F++F
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCC--AFIIF 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,936
Number of Sequences: 336
Number of extensions: 2450
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)