Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n07f
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    27   0.16 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    27   0.16 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.0  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 68  VLTAIVAVSTNEVADPRSTDRSNALSIGSITSSDRLLRSFV 190
           VL   VAV +   A  + T + + + +  I  SDRLL+++V
Sbjct: 5   VLVLFVAVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 68  VLTAIVAVSTNEVADPRSTDRSNALSIGSITSSDRLLRSFV 190
           VL   VAV +   A  + T + + + +  I  SDRLL+++V
Sbjct: 5   VLVLFVAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 445  FLFFRLHKKFVLPIFLINDSRIYYEASLSF 534
            F FF ++  FVL +FL+   + Y      F
Sbjct: 1270 FAFFMMNALFVLIVFLLTLKKDYLHIKWPF 1299


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 445  FLFFRLHKKFVLPIFLINDSRIYYEASLSF 534
            F FF ++  FVL +FL+   + Y      F
Sbjct: 1270 FAFFMMNALFVLIVFLLTLKKDYLHIKWPF 1299


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 379 LYSTSLGTLKCIFWTFTCKDTKF 447
           L ST LGT   I+    CK+ +F
Sbjct: 50  LLSTILGTCWIIYVRIYCKEIRF 72


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 414 ILDVYMQRHEVFVFSFAQKIRSPHFFN 494
           + D++ + HE+ VFS   K   P++++
Sbjct: 235 VQDLHRRGHEIAVFSLTHK-EDPNYWS 260


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 414 ILDVYMQRHEVFVFSFAQKIRSPHFFN 494
           + D++ + HE+ VFS   K   P++++
Sbjct: 242 VQDLHRRGHEIAVFSLTHK-EDPNYWS 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,933
Number of Sequences: 336
Number of extensions: 2230
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)