Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n06f
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.34 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   1.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   4.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   5.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   5.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   5.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   5.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.6  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 460 LGYYDTLLDNSTLLDIW 410
           L YY T  D +T+LD W
Sbjct: 310 LAYYSTTCDIATILDFW 326


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 123 CSPIDTGLPRLLAVQLQTAASTATAKVRT 37
           C P    L R+L   LQT  +  T K RT
Sbjct: 53  CPPQGVDLKRVLPEALQTNCAKCTEKQRT 81


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 148 IPTHLESMVPTVRWYCSHQLPLPF 219
           +  HL S   T+ W+  HQ   P+
Sbjct: 122 VVNHLSSDSTTIHWHGHHQKNSPY 145


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 125 PSLVQIEVFLPILNQW 172
           P +  IE ++P+L QW
Sbjct: 496 PLITLIETWMPLLPQW 511


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 513 ALPP*TVVPHPSRSTKI 463
           ALPP   +P P RS+ I
Sbjct: 70  ALPPKREIPSPKRSSPI 86


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 200 TNYHYLSTATCFHGEFYDPAYRRI 271
           T  HY      + GE Y+P +  +
Sbjct: 301 TQQHYQMNQNMYPGEMYNPEHTTV 324


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 211 VVVGENNTSALLEPLIQDG*EYFNLDQAGVLANRHRSTEI 92
           +V+GE  TS  +  L++    +F+L QA    NR+   ++
Sbjct: 192 IVLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQV 231


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 211 VVVGENNTSALLEPLIQDG*EYFNLDQAGVLANRHRSTEI 92
           +V+GE  TS  +  L++    +F+L QA    NR+   ++
Sbjct: 188 IVLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQV 227


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 200 TNYHYLSTATCFHGEFYDPAYRRI 271
           T  HY      + GE Y+P +  +
Sbjct: 249 TQQHYQMNQNMYPGEMYNPEHTTV 272


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 200 TNYHYLSTATCFHGEFYDPAYRRI 271
           T  HY      + GE Y+P +  +
Sbjct: 432 TQQHYQMNQNMYPGEMYNPEHTTV 455


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 195 FSPTTTTFQLLPVSMENSTIL 257
           FSP+TTT      S  NST L
Sbjct: 6   FSPSTTTTTTTTSSALNSTPL 26


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 195 FSPTTTTFQLLPVSMENSTIL 257
           FSP+TTT      S  NST L
Sbjct: 6   FSPSTTTTTTTTSSALNSTPL 26


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 275 AGSSRRSEPGEISYVHFAV 331
           A + R  EP  I Y HF +
Sbjct: 109 ARACREGEPPRICYYHFTL 127


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 275 AGSSRRSEPGEISYVHFAV 331
           A + R  EP  I Y HF +
Sbjct: 109 ARACREGEPPRICYYHFTL 127


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 260 MQDRRILHGNR*QLKG 213
           ++DRR LHG + Q+ G
Sbjct: 92  IRDRRSLHGPQQQMDG 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,119
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)