Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n05r
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.073
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   3.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   4.8  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 28.3 bits (60), Expect = 0.073
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = -2

Query: 181  SPNWTYRS**LAPRTVTREKRLFLLTQPSVTNWDTRQANL*PSRTSCPNTTSTYRP 14
            SP WT  +      T TR       T+P+ TNW T+   + P     P      +P
Sbjct: 1049 SPWWTTTT--TRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQP 1102


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -1

Query: 554 MRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNK 408
           MR  + + ++LP S+VQ   K R        K        E   + KNK
Sbjct: 98  MREEVALKINLPESRVQVWFKNRRAKCRQQQKQHNQQQSVEKSSKLKNK 146


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +2

Query: 608 YSRISENT*LPRIQSQSKGTSPTQFLGQY*TGVPKHQYTDCTGPHTSLLGSLQPS 772
           YS  S +   P+  S S  TSP   +  Y +    H          +  GS+ PS
Sbjct: 35  YSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPS 89


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +2

Query: 608 YSRISENT*LPRIQSQSKGTSPTQFLGQY*TGVPKHQYTDCTGPHTSLLGSLQPS 772
           YS  S +   P+  S S  TSP   +  Y +    H          +  GS+ PS
Sbjct: 35  YSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPS 89


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 102 WVSRNNLFSLVTVLGASY 155
           W S    +++VT+LGA++
Sbjct: 67  WASARVGYTIVTILGATF 84


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 102 WVSRNNLFSLVTVLGASY 155
           W S    +++VT+LGA++
Sbjct: 67  WASARVGYTIVTILGATF 84


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 102 WVSRNNLFSLVTVLGASY 155
           W S    +++VT+LGA++
Sbjct: 67  WASARVGYTIVTILGATF 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,471
Number of Sequences: 336
Number of extensions: 3707
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)