Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n05f
(604 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P91929 Cluster: NADH dehydrogenase [ubiquinone] 1 alpha... 144 1e-33
UniRef50_Q8MVA8 Cluster: Putative secreted NADH-ubiquinone oxire... 125 7e-28
UniRef50_Q21233 Cluster: Putative uncharacterized protein; n=3; ... 99 4e-20
UniRef50_UPI00015B46E1 Cluster: PREDICTED: similar to mitochondr... 94 2e-18
UniRef50_UPI0000DB7295 Cluster: PREDICTED: similar to NADH dehyd... 93 5e-18
UniRef50_Q6WRX5 Cluster: NADH-ubiquinone oxidoreductase 42 kDa s... 66 5e-10
UniRef50_Q8WXC9 Cluster: NADH dehydrogenase ubiquinone 1 alpha s... 59 9e-08
UniRef50_Q0PWU3 Cluster: Putative NADH:ubiquinone reductase 42kD... 54 3e-06
UniRef50_Q14EL5 Cluster: Deoxyguanosine kinase; n=2; Dictyosteli... 42 0.015
UniRef50_Q13EQ6 Cluster: Signal peptide peptidase SppA, 36K type... 37 0.32
UniRef50_Q9YDD5 Cluster: Cytidylate kinase; n=3; Desulfurococcal... 37 0.42
UniRef50_P00150 Cluster: Cytochrome c-556 precursor; n=8; Bradyr... 36 0.74
UniRef50_O51731 Cluster: Thymidine kinase; n=3; Borrelia burgdor... 36 0.97
UniRef50_Q1NT67 Cluster: Putative uncharacterized protein; n=4; ... 35 1.7
UniRef50_Q5D8X4 Cluster: SJCHGC00839 protein; n=2; Schistosoma j... 34 2.3
UniRef50_Q5NXQ4 Cluster: Deoxynucleoside kinase; n=6; Betaproteo... 34 3.0
UniRef50_Q2AHV1 Cluster: tRNA delta(2)-isopentenylpyrophosphate ... 34 3.0
UniRef50_Q11RE0 Cluster: TRNA isopentenyltransferase (Delta(2)-i... 34 3.0
UniRef50_A7IL92 Cluster: Glycosyl transferase group 1; n=1; Xant... 34 3.0
UniRef50_A1C4X4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q92AV2 Cluster: Lin1817 protein; n=12; Firmicutes|Rep: ... 33 3.9
UniRef50_Q82Y19 Cluster: Deoxynucleoside kinase; n=2; Nitrosomon... 33 3.9
UniRef50_A7HGZ3 Cluster: Deoxynucleoside kinase; n=4; Cystobacte... 33 3.9
UniRef50_Q2U6C7 Cluster: ATP-dependent Lon protease; n=13; Peziz... 33 3.9
UniRef50_A0UHY5 Cluster: AAA ATPase; n=1; Burkholderia multivora... 33 5.2
UniRef50_A0NTK1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q73ET0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q6NI24 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q1GZX4 Cluster: GTP-binding signal recognition particle... 33 6.9
UniRef50_Q01ZF5 Cluster: NHL repeat containing protein precursor... 33 6.9
UniRef50_Q7S0P4 Cluster: Predicted protein; n=1; Neurospora cras... 33 6.9
UniRef50_Q8TZB3 Cluster: Cytidylate kinase; n=14; Euryarchaeota|... 33 6.9
UniRef50_Q89R95 Cluster: ABC transporter substrate-binding prote... 32 9.1
UniRef50_Q7URP6 Cluster: Putative uncharacterized protein; n=1; ... 32 9.1
UniRef50_Q4FPN1 Cluster: tRNA delta(2)-isopentenylpyrophosphate ... 32 9.1
UniRef50_Q3A503 Cluster: tRNA delta(2)-isopentenylpyrophosphate ... 32 9.1
UniRef50_A7S258 Cluster: Predicted protein; n=1; Nematostella ve... 32 9.1
UniRef50_Q8YSZ3 Cluster: Bifunctional pantoate ligase/cytidylate... 32 9.1
UniRef50_Q6MEF6 Cluster: Cytidylate kinase; n=1; Candidatus Prot... 32 9.1
>UniRef50_P91929 Cluster: NADH dehydrogenase [ubiquinone] 1 alpha
subcomplex subunit 10, mitochondrial precursor; n=6;
Endopterygota|Rep: NADH dehydrogenase [ubiquinone] 1
alpha subcomplex subunit 10, mitochondrial precursor -
Drosophila melanogaster (Fruit fly)
Length = 407
Score = 144 bits (350), Expect = 1e-33
Identities = 71/157 (45%), Positives = 98/157 (62%)
Frame = +2
Query: 134 TKIAACTFVQNRNISGRAMREALXXXXXXXXXFDYVNKDYTWLRSLIDRTTHRFDDNSKV 313
T F Q +ISG+ MR + Y K Y+ ++ D+T+ RFD+NSKV
Sbjct: 27 TNALPAAFQQRCSISGKTMRGG--PRVPKAAPYPYKTKKYSVFNAIFDKTSKRFDENSKV 84
Query: 314 IIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTFDH 493
I VEGP+AAGK+ FA LA++L M+++P ++DL YI G D+R D Q+P R++D
Sbjct: 85 ICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144
Query: 494 VNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNT 604
NF +P+H LAA FQI MY+ RYSQYIDAL H+ +T
Sbjct: 145 RNFCLDPSHDLAAQFQIRMYMLRYSQYIDALQHVLST 181
>UniRef50_Q8MVA8 Cluster: Putative secreted NADH-ubiquinone
oxireductase; n=1; Ixodes scapularis|Rep: Putative
secreted NADH-ubiquinone oxireductase - Ixodes
scapularis (Black-legged tick) (Deer tick)
Length = 409
Score = 125 bits (302), Expect = 7e-28
Identities = 58/125 (46%), Positives = 80/125 (64%)
Frame = +2
Query: 230 FDYVNKDYTWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANM 409
F Y K + W LID+ RFD+N+KVI++EG + GKTA A SLAD+LGMK+F E +
Sbjct: 53 FPYATKRFFWYHDLIDKVESRFDENTKVIVLEGNIGVGKTALAKSLADELGMKYFGEPSF 112
Query: 410 DLHYIRPNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALA 589
D Y+ G DLRS D PE RT D F ++P++ A+ Q++M+ R+ +Y+DAL
Sbjct: 113 DQLYVDEYGFDLRSIDHLAPEACRTCDIQKFYEDPHNVNVASMQMIMFQLRFERYLDALV 172
Query: 590 HLFNT 604
HL NT
Sbjct: 173 HLLNT 177
>UniRef50_Q21233 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 436
Score = 99 bits (238), Expect = 4e-20
Identities = 50/125 (40%), Positives = 73/125 (58%)
Frame = +2
Query: 230 FDYVNKDYTWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANM 409
+DY + + ++ L D T F NSK+I+VEG + +GKT A LAD LG HFPE M
Sbjct: 47 WDYKHNGFNYIDGLKDDTRSHFHQNSKLIVVEGNIGSGKTTLAKQLADQLGFVHFPEFRM 106
Query: 410 DLHYIRPNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALA 589
D + G DLR++ ++ P R D F +NP+ L+A Q ++ R+ QY++ALA
Sbjct: 107 DDILVDRYGNDLRNYYNKFPARYRLPDISMFYKNPSGELSAAMQDRIFNCRFDQYLNALA 166
Query: 590 HLFNT 604
H+ NT
Sbjct: 167 HILNT 171
>UniRef50_UPI00015B46E1 Cluster: PREDICTED: similar to mitochondrial
NADH-ubiquinone oxidoreductase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to mitochondrial
NADH-ubiquinone oxidoreductase - Nasonia vitripennis
Length = 420
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/125 (36%), Positives = 72/125 (57%)
Frame = +2
Query: 230 FDYVNKDYTWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANM 409
+ Y K+YT + ++D R ++SK+I+++G VA+GK+ A LA + + P+
Sbjct: 54 YPYHEKEYTVFQMIMDTNKCRVHEHSKLIVIDGQVASGKSKLAQELAKEFDFLYLPQPTF 113
Query: 410 DLHYIRPNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALA 589
D I G D+R D +P+D +++D F QNP+ R Q+ MY+ R QYID+LA
Sbjct: 114 DDLLITKWGFDVRQLDHLLPKDAQSWDIERFLQNPHDRNTIAMQLYMYMMRQKQYIDSLA 173
Query: 590 HLFNT 604
H+F T
Sbjct: 174 HIFCT 178
>UniRef50_UPI0000DB7295 Cluster: PREDICTED: similar to NADH
dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
10, mitochondrial precursor (NADH-ubiquinone
oxidoreductase 42 kDa subunit) (Complex I-42KD)
(CI-42KD); n=1; Apis mellifera|Rep: PREDICTED: similar
to NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 10, mitochondrial precursor (NADH-ubiquinone
oxidoreductase 42 kDa subunit) (Complex I-42KD)
(CI-42KD) - Apis mellifera
Length = 400
Score = 93.1 bits (221), Expect = 5e-18
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +2
Query: 149 CTFVQNRNISGRAM--REALXXXXXXXXXFDYVNKDYTWLRSLIDRTTHRFDDNSKVIIV 322
C +N NI+ A R A + Y K + ++D T+ R+DDN+K+I+V
Sbjct: 22 CKISKNYNITQVAFIKRIAFKEHIPKPAPYPYWKKVCNEITMILDPTSLRYDDNTKLIVV 81
Query: 323 EGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTFDHVNF 502
+GP A GKT +A D G + P D +I G D+R + Q+PE R +D +F
Sbjct: 82 DGPPAVGKTKLCEQIAKDFGFLYMPAPTHDEIFINYYGFDIRDLNPQLPESCRFYDLKDF 141
Query: 503 NQNPNHRLAANFQIMMYVARYSQYIDALAHLFNT 604
+NP + A+ Q+ + R+ QY++AL H+ T
Sbjct: 142 LRNPYYYRTASIQLGFFNMRFEQYMNALVHILAT 175
>UniRef50_Q6WRX5 Cluster: NADH-ubiquinone oxidoreductase 42 kDa
subunit; n=1; Branchiostoma belcheri tsingtauense|Rep:
NADH-ubiquinone oxidoreductase 42 kDa subunit -
Branchiostoma belcheri tsingtauense
Length = 368
Score = 66.5 bits (155), Expect = 5e-10
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +2
Query: 251 YTWLRSLI-DRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIR 427
Y+W ++ D + + ++ SK+ +++G +A GKT L + LGMK+FPE +D+HY
Sbjct: 51 YSWFNYVLGDWFSRKENERSKIFVIDGNLAVGKTTLGKELGEKLGMKYFPE--VDVHYFD 108
Query: 428 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNT 604
D D + + D+ +P+ + FQ++M++ RY Q+ +A+ HL T
Sbjct: 109 RFEGDGSPMDKRFSGNVSLEDYYKNPSDPDGH-SIRFQMVMFMMRYFQFCEAMNHLIAT 166
>UniRef50_Q8WXC9 Cluster: NADH dehydrogenase ubiquinone 1 alpha
subcomplex; n=3; Eutheria|Rep: NADH dehydrogenase
ubiquinone 1 alpha subcomplex - Homo sapiens (Human)
Length = 429
Score = 58.8 bits (136), Expect = 9e-08
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +2
Query: 257 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 427
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 428 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNT 604
+G L + + + +D N ++RL Q +Y +R QY DAL HL T
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTT 153
>UniRef50_Q0PWU3 Cluster: Putative NADH:ubiquinone reductase 42kD
subunit; n=1; Diaphorina citri|Rep: Putative
NADH:ubiquinone reductase 42kD subunit - Diaphorina
citri (Asian citrus psyllid)
Length = 297
Score = 53.6 bits (123), Expect = 3e-06
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 395 PEANMDLHYIRPNGVDLRSFDDQVP-EDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQ 571
P ANMD+ Y R + D RS D + E+ +++D F ++P H FQI M R+S
Sbjct: 1 PPANMDMFYKRGD-FDWRSLDAEWSNENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSV 59
Query: 572 YIDALAHLFNT 604
Y+DALAH+ +T
Sbjct: 60 YVDALAHMLST 70
>UniRef50_Q14EL5 Cluster: Deoxyguanosine kinase; n=2; Dictyostelium
discoideum|Rep: Deoxyguanosine kinase - Dictyostelium
discoideum (Slime mold)
Length = 285
Score = 41.5 bits (93), Expect = 0.015
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +2
Query: 242 NKDYTWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY 421
NK+ + S+ TT++ ++ SK+II+EG ++AGKT ++ L D LG K F E Y
Sbjct: 13 NKNTNMVSSI--NTTNKVNNFSKIIILEGNISAGKTYLSSKLGDLLGYKVFLEPTATNPY 70
Query: 422 I 424
+
Sbjct: 71 L 71
>UniRef50_Q13EQ6 Cluster: Signal peptide peptidase SppA, 36K type;
n=6; Rhizobiales|Rep: Signal peptide peptidase SppA, 36K
type - Rhodopseudomonas palustris (strain BisB5)
Length = 326
Score = 37.1 bits (82), Expect = 0.32
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 239 VNKDYTWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLH 418
V Y W R ++ + DDN ++ +G V G+ A L D+LG + A ++
Sbjct: 197 VRDSYAWFRDMV-KQRRSMDDNQLGVVADGRVFTGRQALGLKLIDELGDEKTAVAWLETE 255
Query: 419 YIRPNGVDLRSF 454
+G+ +R F
Sbjct: 256 KKIKSGLPVRDF 267
>UniRef50_Q9YDD5 Cluster: Cytidylate kinase; n=3;
Desulfurococcales|Rep: Cytidylate kinase - Aeropyrum
pernix
Length = 172
Score = 36.7 bits (81), Expect = 0.42
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 317 IVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTR 481
++ GP +GK+ +A LA+DLG+ ++ + R G+ L ED R
Sbjct: 1 MISGPPGSGKSTYAKRLAEDLGLSYYSTGTIFRSIARERGLSLAEMSRLAEEDPR 55
>UniRef50_P00150 Cluster: Cytochrome c-556 precursor; n=8;
Bradyrhizobiaceae|Rep: Cytochrome c-556 precursor -
Rhodopseudomonas palustris
Length = 149
Score = 35.9 bits (79), Expect = 0.74
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 263 RSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGV- 439
+ L+D+T DN + ++V G +A G+ + + A D +K F E DL + P+ V
Sbjct: 22 QDLVDKTQKLMKDNGRNMMVLGAIAKGEKPYDQA-AVDAALKQFDETAKDLPKLFPDSVK 80
Query: 440 DLRSFDDQ 463
L+ FD +
Sbjct: 81 GLKPFDSK 88
>UniRef50_O51731 Cluster: Thymidine kinase; n=3; Borrelia
burgdorferi group|Rep: Thymidine kinase - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 367
Score = 35.5 bits (78), Expect = 0.97
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 233 DYVNKDYTWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADD 376
D+ NK+ T L +++ + F +I+V GP+ +GKT +AA + D
Sbjct: 6 DFANKEDTKLNNIVSVSHFDFRVKINLILVVGPMGSGKTEYAAKIYKD 53
>UniRef50_Q1NT67 Cluster: Putative uncharacterized protein; n=4;
delta proteobacterium MLMS-1|Rep: Putative
uncharacterized protein - delta proteobacterium MLMS-1
Length = 379
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 290 RFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPN 433
R D +++ V GP GKT FA SL + +KH N D +RP+
Sbjct: 14 RQDLRERMVFVGGPRQVGKTIFALSLLPEPSVKHPAYLNWDNPRVRPS 61
>UniRef50_Q5D8X4 Cluster: SJCHGC00839 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC00839 protein - Schistosoma
japonicum (Blood fluke)
Length = 242
Score = 34.3 bits (75), Expect = 2.3
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = -1
Query: 475 VLGYLVVEGPQVDAVRTNIVQIHVSFGEMLHTQVIG*GGCKGGLTSSYRPFHDYHFAVI 299
++G+LV + PQ+ R+ ++ IHV+FG L+ +I G C G+T + F +++V+
Sbjct: 145 LIGFLVPQTPQI--ARSKLLPIHVTFGSFLYLLMI--GVCISGITE--KNFFSKNYSVL 197
>UniRef50_Q5NXQ4 Cluster: Deoxynucleoside kinase; n=6;
Betaproteobacteria|Rep: Deoxynucleoside kinase -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 213
Score = 33.9 bits (74), Expect = 3.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 299 DNSKVIIVEGPVAAGKTAFAASLADDL 379
D ++ I++EGP+ AGKT+ A LA+ L
Sbjct: 3 DKARYIVIEGPIGAGKTSLARRLAERL 29
>UniRef50_Q2AHV1 Cluster: tRNA delta(2)-isopentenylpyrophosphate
transferase; n=2; Clostridia|Rep: tRNA
delta(2)-isopentenylpyrophosphate transferase -
Halothermothrix orenii H 168
Length = 328
Score = 33.9 bits (74), Expect = 3.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 293 FDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLH 418
+ DNS +I++ GP A GKT+ + LA D+ + +M ++
Sbjct: 14 YPDNSTLIVILGPTAVGKTSLSLQLARDINGEIISADSMQIY 55
>UniRef50_Q11RE0 Cluster: TRNA isopentenyltransferase
(Delta(2)-isopentenylpyrophosphate tRNA- adenosine
transferase); n=2; Flexibacteraceae|Rep: TRNA
isopentenyltransferase
(Delta(2)-isopentenylpyrophosphate tRNA- adenosine
transferase) - Cytophaga hutchinsonii (strain ATCC 33406
/ NCIMB 9469)
Length = 304
Score = 33.9 bits (74), Expect = 3.0
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 302 NSKVIIVEGPVAAGKTAFAASLA 370
N VI+V GP AAGKTA A SLA
Sbjct: 5 NKYVIVVVGPTAAGKTALAVSLA 27
>UniRef50_A7IL92 Cluster: Glycosyl transferase group 1; n=1;
Xanthobacter autotrophicus Py2|Rep: Glycosyl transferase
group 1 - Xanthobacter sp. (strain Py2)
Length = 417
Score = 33.9 bits (74), Expect = 3.0
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -3
Query: 428 DEYSANPC*LRGNASYPSHRLGRLQRRSYQQLPALPRLSLCCYHQTCGSCGRLSCATKCS 249
D + + C + + LG + +R + +P ++L C+ T G+ +C T+C+
Sbjct: 104 DAFKPDFCNVHYMTGLGHNALGEIGKRGIPMMYVMPDMALSCFRSTMFVNGK-TCETQCN 162
Query: 248 PC 243
PC
Sbjct: 163 PC 164
>UniRef50_A1C4X4 Cluster: Putative uncharacterized protein; n=1;
Aspergillus clavatus|Rep: Putative uncharacterized
protein - Aspergillus clavatus
Length = 267
Score = 33.9 bits (74), Expect = 3.0
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 254 TWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEA 403
T L S++ D ++K+I++ G AGK+ AASLA +L + H A
Sbjct: 59 TDLTSMLPCHASIHDSDAKIILIIGGPGAGKSTVAASLAAELNLVHIDAA 108
>UniRef50_Q92AV2 Cluster: Lin1817 protein; n=12; Firmicutes|Rep:
Lin1817 protein - Listeria innocua
Length = 214
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 305 SKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMD 412
+KVI++ G + AGK+++ +A++LG K F E+ D
Sbjct: 6 NKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKD 41
>UniRef50_Q82Y19 Cluster: Deoxynucleoside kinase; n=2;
Nitrosomonas|Rep: Deoxynucleoside kinase - Nitrosomonas
europaea
Length = 214
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 299 DNSKVIIVEGPVAAGKTAFAASLADDLG---MKHFPEAN 406
+ + I+VEGP+ AGKT+ A ++A L M PEAN
Sbjct: 4 ERCRYIVVEGPIGAGKTSLARNMATRLNYSLMLEQPEAN 42
>UniRef50_A7HGZ3 Cluster: Deoxynucleoside kinase; n=4;
Cystobacterineae|Rep: Deoxynucleoside kinase -
Anaeromyxobacter sp. Fw109-5
Length = 215
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 299 DNSKVIIVEGPVAAGKTAFAASLADDLGMK 388
+ + I VEGP+ GKTA A +LA+ LG +
Sbjct: 2 ERPRYIAVEGPIGVGKTALAQALAERLGAR 31
>UniRef50_Q2U6C7 Cluster: ATP-dependent Lon protease; n=13;
Pezizomycotina|Rep: ATP-dependent Lon protease -
Aspergillus oryzae
Length = 933
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 290 RFDDNSKVIIVEGPVAAGKTAFAASLADDLGMK 388
R D S ++++ GP GKT+ A S+A LG K
Sbjct: 475 RMTDKSPILLLAGPPGTGKTSLARSVATSLGRK 507
>UniRef50_A0UHY5 Cluster: AAA ATPase; n=1; Burkholderia multivorans
ATCC 17616|Rep: AAA ATPase - Burkholderia multivorans
ATCC 17616
Length = 238
Score = 33.1 bits (72), Expect = 5.2
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +2
Query: 284 THRFD-DNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEA-NMDLHYIRP--NGVDL-R 448
T+RF D +I+ GP GKT A L + KH E N+ RP NGVDL
Sbjct: 35 TYRFPADGKNGLILYGPYGTGKTTVAELLPAAIEAKHSAETPNVRAEACRPSHNGVDLIA 94
Query: 449 SFDDQV 466
S +Q+
Sbjct: 95 SISEQI 100
>UniRef50_A0NTK1 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 226
Score = 33.1 bits (72), Expect = 5.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 305 SKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIR 427
S V+++ GPV AGKT + D+ G P A + H ++
Sbjct: 44 SPVVVLAGPVGAGKTHLVRAFQDETGAVVLPAAELTPHSVQ 84
>UniRef50_Q73ET0 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus ATCC 10987|Rep: Putative uncharacterized
protein - Bacillus cereus (strain ATCC 10987)
Length = 101
Score = 32.7 bits (71), Expect = 6.9
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 311 VIIVEGPVAAGKTAFAASLADDLGMK 388
VII+EG + AGKT F LA LG+K
Sbjct: 33 VIILEGDLGAGKTTFTKGLAKGLGVK 58
>UniRef50_Q6NI24 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium diphtheriae|Rep: Putative
uncharacterized protein - Corynebacterium diphtheriae
Length = 152
Score = 32.7 bits (71), Expect = 6.9
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 311 VIIVEGPVAAGKTAFAASLADDLGMK--HFPE 400
+++++GP +GKT FA L + LGM+ HF +
Sbjct: 2 IVLIDGPSGSGKTTFAGFLGEILGMRIVHFDD 33
>UniRef50_Q1GZX4 Cluster: GTP-binding signal recognition particle
SRP54, G-domain; n=1; Methylobacillus flagellatus
KT|Rep: GTP-binding signal recognition particle SRP54,
G-domain - Methylobacillus flagellatus (strain KT / ATCC
51484 / DSM 6875)
Length = 536
Score = 32.7 bits (71), Expect = 6.9
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +2
Query: 257 WLRSLIDRTTHRFDDNSKVI------IVEGPVAAGKTAFAASLADDLGMKHFP 397
WL+++I H D +++ + GP GKT A LA MKH P
Sbjct: 217 WLQNVISNNIHTISDEQQILDQGGIYALVGPTGVGKTTTTAKLAARFVMKHGP 269
>UniRef50_Q01ZF5 Cluster: NHL repeat containing protein precursor;
n=1; Solibacter usitatus Ellin6076|Rep: NHL repeat
containing protein precursor - Solibacter usitatus
(strain Ellin6076)
Length = 328
Score = 32.7 bits (71), Expect = 6.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 299 DNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANM 409
DN +V+ G A FA+S+AD GMK P+ N+
Sbjct: 83 DNDRVLRYNGVTGAFLNTFASSVADAAGMKFGPDGNL 119
>UniRef50_Q7S0P4 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 461
Score = 32.7 bits (71), Expect = 6.9
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +2
Query: 263 RSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADD-LGMKHFPEA---NMDLHYIRP 430
+++ RT+HR + VI+V G +GK+ F + L ++ G+ H + ++DL+
Sbjct: 12 KAMARRTSHRMGPSDVVILVMGMTGSGKSQFVSKLTEENAGVGHSLTSGTISLDLYSCVK 71
Query: 431 NGVDLRSFDDQVPEDTRTFD 490
NG + D DT+ D
Sbjct: 72 NGQRIFMADTPGFNDTQISD 91
>UniRef50_Q8TZB3 Cluster: Cytidylate kinase; n=14;
Euryarchaeota|Rep: Cytidylate kinase - Methanopyrus
kandleri
Length = 193
Score = 32.7 bits (71), Expect = 6.9
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 305 SKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRT 484
S VI + G +G T A LA+ G+KH + G+DL F +V ED
Sbjct: 5 SVVITIGGLPGSGTTTMARRLAEHYGLKHVYAGKIFREMAEERGMDLEEF-SKVAEDNPD 63
Query: 485 FD 490
D
Sbjct: 64 ID 65
>UniRef50_Q89R95 Cluster: ABC transporter substrate-binding protein;
n=8; Proteobacteria|Rep: ABC transporter
substrate-binding protein - Bradyrhizobium japonicum
Length = 531
Score = 32.3 bits (70), Expect = 9.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 332 VAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTFDHV 496
++ G+T FAA+LA L + P ++ L Y N DL+S D ++ T H+
Sbjct: 1 MSVGRTLFAATLAGTLALAVSPASSQTLRY--ANQGDLKSLDPYTLNESTTHAHL 53
>UniRef50_Q7URP6 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 7223
Score = 32.3 bits (70), Expect = 9.1
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 296 DDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDL 445
DDN + + GP+ AG F ++ADDLG +A ++L RP D+
Sbjct: 6923 DDNGVLTYLPGPLFAGVDTFTYTIADDLGQAS-AQATVELQG-RPTASDI 6970
>UniRef50_Q4FPN1 Cluster: tRNA delta(2)-isopentenylpyrophosphate
transferase; n=2; Candidatus Pelagibacter ubique|Rep:
tRNA delta(2)-isopentenylpyrophosphate transferase -
Pelagibacter ubique
Length = 313
Score = 32.3 bits (70), Expect = 9.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 296 DDNSKVIIVEGPVAAGKTAFAASLA 370
D SK+I++ GP A+GK+ FA +A
Sbjct: 2 DKQSKIILISGPTASGKSNFAVKIA 26
>UniRef50_Q3A503 Cluster: tRNA delta(2)-isopentenylpyrophosphate
transferase; n=2; Desulfuromonadales|Rep: tRNA
delta(2)-isopentenylpyrophosphate transferase -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 314
Score = 32.3 bits (70), Expect = 9.1
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +2
Query: 293 FDDNSK---VIIVEGPVAAGKTAFAASLADDL 379
FD N K ++++ GP AAGKTA A LA +L
Sbjct: 3 FDHNDKRPPIVVLCGPTAAGKTALAVRLAGEL 34
>UniRef50_A7S258 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 200
Score = 32.3 bits (70), Expect = 9.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 302 NSKVIIVEGPVAAGKTAFAASLADDLGMKHFPE 400
++KVII+EG + GKT A LA L K F E
Sbjct: 13 SAKVIILEGNIGVGKTTLACQLARKLNYKLFLE 45
>UniRef50_Q8YSZ3 Cluster: Bifunctional pantoate ligase/cytidylate
kinase [Includes: Pantoate-- beta-alanine ligase (EC
6.3.2.1) (Pantothenate synthetase) (Pantoate- activating
enzyme); Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine
monophosphate kinase) (CMP kinase)]; n=12; Bacteria|Rep:
Bifunctional pantoate ligase/cytidylate kinase
[Includes: Pantoate-- beta-alanine ligase (EC 6.3.2.1)
(Pantothenate synthetase) (Pantoate- activating enzyme);
Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine
monophosphate kinase) (CMP kinase)] - Anabaena sp.
(strain PCC 7120)
Length = 534
Score = 32.3 bits (70), Expect = 9.1
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 269 LIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANM 409
LID T R D +I ++GP AGK+ A +A LG+ + M
Sbjct: 298 LIDNTILR--DRQPIIAIDGPAGAGKSTVARQVATKLGLVYLDTGAM 342
>UniRef50_Q6MEF6 Cluster: Cytidylate kinase; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Cytidylate kinase
- Protochlamydia amoebophila (strain UWE25)
Length = 228
Score = 32.3 bits (70), Expect = 9.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 311 VIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTF- 487
+I ++GPVA GK+ A LA+ +G F M + G+ D P+ + +
Sbjct: 2 IITIDGPVATGKSTIAKKLAESIGFIFFDTGAM--YRALTFGILKNQIDLSDPDTLQNYL 59
Query: 488 DHVNFN 505
DH F+
Sbjct: 60 DHFQFD 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,853,072
Number of Sequences: 1657284
Number of extensions: 11196477
Number of successful extensions: 31284
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 30098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31256
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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