Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n05f
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 153 VHAAIFVP*VGLITLITAVLTRVAIVANV 67
           VH  I V  +G + ++  ++  +AI+AN+
Sbjct: 404 VHRKIMVQSLGRVGVLVVIIGTLAIIANL 432


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 153 VHAAIFVP*VGLITLITAVLTRVAIVANV 67
           VH  I V  +G + ++  ++  +AI+AN+
Sbjct: 129 VHRKIMVQSLGRVGVLVVIIGTLAIIANL 157


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 404  NMDLHYIRPNGVDLRSFDDQVPEDTRTFDHVNFNQN 511
            N  +HY    G D R     +P   ++F   + NQN
Sbjct: 2045 NFTIHYWIEKGADRRKLVMGMPMYGQSFSLADNNQN 2080


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,933
Number of Sequences: 336
Number of extensions: 3014
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)