Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n02r
(447 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VSS2 Cluster: Signal recognition particle 68 kDa prot... 109 4e-23
UniRef50_Q9UHB9-2 Cluster: Isoform 2 of Q9UHB9 ; n=3; Catarrhini... 80 2e-14
UniRef50_Q9UHB9 Cluster: Signal recognition particle 68 kDa prot... 80 2e-14
UniRef50_UPI000051A414 Cluster: PREDICTED: similar to Probable s... 75 9e-13
UniRef50_Q20822 Cluster: Probable signal recognition particle 68... 69 6e-11
UniRef50_A7SU98 Cluster: Predicted protein; n=1; Nematostella ve... 66 2e-10
UniRef50_UPI0000D56DC1 Cluster: PREDICTED: similar to Probable s... 48 1e-04
UniRef50_Q9FH46 Cluster: Signal recognition particle 68kD protei... 46 4e-04
UniRef50_A6SBA4 Cluster: Putative uncharacterized protein; n=2; ... 46 5e-04
UniRef50_Q4WK26 Cluster: Signal recognition particle, putative; ... 44 0.001
UniRef50_A3BRW5 Cluster: Putative uncharacterized protein; n=2; ... 42 0.008
UniRef50_A6RAM4 Cluster: Putative uncharacterized protein; n=1; ... 41 0.014
UniRef50_A5E083 Cluster: Putative uncharacterized protein; n=1; ... 40 0.032
UniRef50_UPI0001509B9F Cluster: hypothetical protein TTHERM_0084... 38 0.099
UniRef50_Q6BMV4 Cluster: Signal recognition particle subunit SRP... 36 0.40
UniRef50_O74436 Cluster: Signal recognition particle subunit; n=... 36 0.53
UniRef50_A1S109 Cluster: Glycosyl transferase, group 1; n=1; The... 32 4.9
UniRef50_A7ANZ7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.6
>UniRef50_Q9VSS2 Cluster: Signal recognition particle 68 kDa
protein; n=6; Endopterygota|Rep: Signal recognition
particle 68 kDa protein - Drosophila melanogaster (Fruit
fly)
Length = 604
Score = 109 bits (261), Expect = 4e-23
Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Frame = -2
Query: 413 GKKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLTG 234
GK+VRPQDL RLYEIILQN E+QQ+ G E+DA YQ E++ ++AFRCYYIA L
Sbjct: 389 GKRVRPQDLARLYEIILQNVTEMQQINGLEDDATYQSEVENLAITFKAFRCYYIALTLID 448
Query: 233 LRRFREALAMLERCNTYTVESXXXXXX-XXXXXXXXXXXXXDIESCKFEVHADSVL 69
+++++EA+A+ ER + Y E+ I+ CKF HA SVL
Sbjct: 449 IKKWKEAVALYERASNYATEALKGKSSPEFQLQEELKKVVSAIDGCKFSAHAYSVL 504
>UniRef50_Q9UHB9-2 Cluster: Isoform 2 of Q9UHB9 ; n=3;
Catarrhini|Rep: Isoform 2 of Q9UHB9 - Homo sapiens
(Human)
Length = 596
Score = 79.8 bits (188), Expect = 2e-14
Identities = 37/76 (48%), Positives = 51/76 (67%)
Frame = -2
Query: 401 RPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLTGLRRF 222
RPQDL RLY+IILQN EL QLPG E D +QKEI + ++A+RC++IAQ ++++
Sbjct: 389 RPQDLIRLYDIILQNLVELLQLPGLEEDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKW 448
Query: 221 REALAMLERCNTYTVE 174
EAL + +R Y E
Sbjct: 449 SEALVLYDRVLKYANE 464
>UniRef50_Q9UHB9 Cluster: Signal recognition particle 68 kDa
protein; n=42; Euteleostomi|Rep: Signal recognition
particle 68 kDa protein - Homo sapiens (Human)
Length = 627
Score = 79.8 bits (188), Expect = 2e-14
Identities = 37/76 (48%), Positives = 51/76 (67%)
Frame = -2
Query: 401 RPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLTGLRRF 222
RPQDL RLY+IILQN EL QLPG E D +QKEI + ++A+RC++IAQ ++++
Sbjct: 420 RPQDLIRLYDIILQNLVELLQLPGLEEDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKW 479
Query: 221 REALAMLERCNTYTVE 174
EAL + +R Y E
Sbjct: 480 SEALVLYDRVLKYANE 495
>UniRef50_UPI000051A414 Cluster: PREDICTED: similar to Probable
signal recognition particle 68 kDa protein (SRP68); n=2;
Apocrita|Rep: PREDICTED: similar to Probable signal
recognition particle 68 kDa protein (SRP68) - Apis
mellifera
Length = 576
Score = 74.5 bits (175), Expect = 9e-13
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = -2
Query: 407 KVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLTGLR 228
K +PQD+ RLYE L N E+ QL ++D + +E + + K YRAFRCYY+AQ L L
Sbjct: 367 KTKPQDIVRLYEAALHNLVEISQL---QDDEEFIREQEAKTKGYRAFRCYYMAQSLANLH 423
Query: 227 RFREALAMLERCNTYTVESXXXXXXX--XXXXXXXXXXXXDIESCKFEVHADSVL 69
R+R+A+A+ +R + ++ IE K+ HA SVL
Sbjct: 424 RWRDAMALYQRSAQHAKDALENYDNVLPESLKEALQKLEISIEGAKYAAHAHSVL 478
>UniRef50_Q20822 Cluster: Probable signal recognition particle 68
kDa protein; n=3; Caenorhabditis|Rep: Probable signal
recognition particle 68 kDa protein - Caenorhabditis
elegans
Length = 622
Score = 68.5 bits (160), Expect = 6e-11
Identities = 27/72 (37%), Positives = 49/72 (68%)
Frame = -2
Query: 410 KKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLTGL 231
KK +PQDL RLY+ +++ Y E+ ++PG ++D + + +++ YRAFRC+Y+A + L
Sbjct: 371 KKSKPQDLLRLYDSVIEIYKEVAEIPGADHDKNLIQAFEVKVEYYRAFRCFYMASSYSAL 430
Query: 230 RRFREALAMLER 195
++ EA A+ +R
Sbjct: 431 HKYSEAAALFDR 442
>UniRef50_A7SU98 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 575
Score = 66.5 bits (155), Expect = 2e-10
Identities = 28/76 (36%), Positives = 48/76 (63%)
Frame = -2
Query: 410 KKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLTGL 231
K +P+D+ R+Y+IILQN +++ +L E+D KEI Q Y+A+RC+YIA
Sbjct: 366 KLTKPEDMVRIYDIILQNLSDMSELHSVEDDLELTKEIAAQTLEYKAYRCFYIAHSYLLA 425
Query: 230 RRFREALAMLERCNTY 183
+++REA + +R ++
Sbjct: 426 KKWREAAVLYDRVTSH 441
>UniRef50_UPI0000D56DC1 Cluster: PREDICTED: similar to Probable
signal recognition particle 68 kDa protein (SRP68); n=1;
Tribolium castaneum|Rep: PREDICTED: similar to Probable
signal recognition particle 68 kDa protein (SRP68) -
Tribolium castaneum
Length = 563
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/83 (26%), Positives = 45/83 (54%)
Frame = -2
Query: 446 EEARKNNIQIXGKKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAF 267
E + ++ + + + QD RL +II+Q EL Q ++ + Q + Q++A++A
Sbjct: 340 ERTSQRHLLLMQQTRKSQDCVRLLDIIIQQTGELSQNESIKDVKLAQDYYNQQLQAFKAL 399
Query: 266 RCYYIAQVLTGLRRFREALAMLE 198
R Y++A+ +RF+EA + +
Sbjct: 400 RVYFLAKTQAAQKRFKEAAVLYD 422
>UniRef50_Q9FH46 Cluster: Signal recognition particle 68kD
protein-like; n=4; Magnoliophyta|Rep: Signal recognition
particle 68kD protein-like - Arabidopsis thaliana
(Mouse-ear cress)
Length = 605
Score = 46.0 bits (104), Expect = 4e-04
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = -2
Query: 410 KKVRPQDLTRLYEIILQNYNELQQLPGFEND-----AVYQKEIDTQMKAYRAFRCYYIAQ 246
K RP++L RLY+++LQN +L L D +++E A+RA RC+Y+A+
Sbjct: 383 KVTRPEELVRLYDLLLQNVADLSDLISSGRDRKPEEIAFEEECQRTSLAFRAERCFYLAK 442
Query: 245 VLTGLRRFREALAMLERCNT 186
+ + EA A+ R +
Sbjct: 443 SYSLAGKRAEAFALYSRARS 462
>UniRef50_A6SBA4 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 618
Score = 45.6 bits (103), Expect = 5e-04
Identities = 23/75 (30%), Positives = 42/75 (56%)
Frame = -2
Query: 419 IXGKKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVL 240
I K + ++ LY+ ILQ+ +++LPG D+ Q+E+D + ++A +C IA+
Sbjct: 383 IGRKLAKLREKVVLYDAILQSVESIKELPGVAADSSLQEELDAKYSYFQALKCLIIARSH 442
Query: 239 TGLRRFREALAMLER 195
L + +LA+L R
Sbjct: 443 AILSNPKNSLALLNR 457
>UniRef50_Q4WK26 Cluster: Signal recognition particle, putative;
n=8; Eurotiomycetidae|Rep: Signal recognition particle,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 646
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -2
Query: 413 GKKV-RPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLT 237
GKK+ R ++ LY+ ILQ+ + +LPG D + +E++ + +RA RC IA+
Sbjct: 429 GKKLTRLREKVVLYDSILQSIEFILELPGVAADTTFVQELEAKRCYFRALRCLSIARSHC 488
Query: 236 GLRRFREALAMLERCNTYTVES 171
L + ALA+ + T +S
Sbjct: 489 YLGNSKNALALYSQAMQLTAQS 510
>UniRef50_A3BRW5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 597
Score = 41.5 bits (93), Expect = 0.008
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = -2
Query: 410 KKVRPQDLTRLYEIILQNYNELQQLPGFENDA-----VYQKEIDTQMKAYRAFRCYYIAQ 246
K +P++L RLY++++QN +L L D + +E + + A+RA RC+Y+A+
Sbjct: 349 KITKPEELVRLYDLLIQNTTDLTDLISSGRDKNKEENTFIQEYELKSLAFRAERCFYLAK 408
Query: 245 VLTGLRRFREALAMLERCNTYT 180
+ + E+ A+ + T
Sbjct: 409 SYSSAGKRAESYALFCHARSIT 430
>UniRef50_A6RAM4 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 645
Score = 40.7 bits (91), Expect = 0.014
Identities = 20/85 (23%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = -2
Query: 446 EEARKNNIQIXGKKV-RPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRA 270
+++R+++ + G+++ R ++ T LY+ LQ+ + +++LPG D + +E++ +++
Sbjct: 387 QKSRRSSGKGIGRRLARLRERTTLYDATLQSLDFIRELPGVAGDVDFVEELNATRNYFQS 446
Query: 269 FRCYYIAQVLTGLRRFREALAMLER 195
RC + + L + ALA+ R
Sbjct: 447 LRCLAVGRAHALLSSPKNALALFSR 471
>UniRef50_A5E083 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 579
Score = 39.5 bits (88), Expect = 0.032
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = -2
Query: 419 IXGKKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVL 240
+ GK +D+ RL+ I+Q EL+ LPG ND ++ + Y + IA+
Sbjct: 362 LAGKAENSKDIVRLFNGIIQIVKELEDLPGVYNDEDLHYSLEHLEQYYEYKKNVVIAEAY 421
Query: 239 TGLRRFREALAMLERCN 189
RF EAL + + N
Sbjct: 422 QLSSRFAEALKIFDYVN 438
>UniRef50_UPI0001509B9F Cluster: hypothetical protein
TTHERM_00842530; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00842530 - Tetrahymena
thermophila SB210
Length = 597
Score = 37.9 bits (84), Expect = 0.099
Identities = 16/71 (22%), Positives = 40/71 (56%)
Frame = -2
Query: 410 KKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLTGL 231
K +RP ++ +L + +LQ + ++ ++ + +++D ++A RCYY++ V
Sbjct: 380 KLIRPTEIIKLCDNLLQVFKQIIEVERQNTNLENYRKLDVLEFHFKAIRCYYVSCVYLAN 439
Query: 230 RRFREALAMLE 198
++ E L++L+
Sbjct: 440 SKYIETLSLLK 450
>UniRef50_Q6BMV4 Cluster: Signal recognition particle subunit SRP68;
n=2; Saccharomycetaceae|Rep: Signal recognition particle
subunit SRP68 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 587
Score = 35.9 bits (79), Expect = 0.40
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 395 QDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRCYYIAQVLTGLRRFRE 216
+D+ RLY I+ E++ LPG ND + +D K + A + +A+ +F E
Sbjct: 372 KDIIRLYGTIITTTQEIKDLPGVYNDEDLHESLDNLEKFFVAKKSAVLARSFALNNKFPE 431
Query: 215 ALAMLE 198
AL + +
Sbjct: 432 ALKIFD 437
>UniRef50_O74436 Cluster: Signal recognition particle subunit; n=1;
Schizosaccharomyces pombe|Rep: Signal recognition
particle subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 597
Score = 35.5 bits (78), Expect = 0.53
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = -2
Query: 440 ARKNNIQIXGKKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQKEIDTQMKAYRAFRC 261
A +N+ ++ + + + LY+ I++N ++LPG D +++ Q+ ++ RC
Sbjct: 376 AVENDSELVASQAQLRSRQSLYDSIIKNIEIAKELPGIARDTGMTAQLEAQISLAKSKRC 435
Query: 260 YYIAQVLTGLRRFREALAMLERCNTY 183
IA + +LAM R +Y
Sbjct: 436 QAIADAYQAQDKL-ASLAMCVRAASY 460
>UniRef50_A1S109 Cluster: Glycosyl transferase, group 1; n=1;
Thermofilum pendens Hrk 5|Rep: Glycosyl transferase,
group 1 - Thermofilum pendens (strain Hrk 5)
Length = 343
Score = 32.3 bits (70), Expect = 4.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 263 NGTRDTPSFAYRFPFDKLRRSQSPATVAVHCNSAE 367
+G DT FA R PF+KL + AT+ +H S E
Sbjct: 219 HGLEDTVRFAERIPFEKLPQLYRSATIFIHTCSKE 253
>UniRef50_A7ANZ7 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 1052
Score = 31.5 bits (68), Expect = 8.6
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 413 GKKVRPQDLTRLYEIILQNYNELQQLPGFENDAVYQK-EIDTQMKAYRAFRCYYIAQVLT 237
G K + LTRL E++ + + L+ + ND V K EI + Y A R ++VLT
Sbjct: 236 GHKGFERSLTRLKEMVQSSEDSLKAMRSVSNDVVELKAEIKKDQERYNALRLKIPSEVLT 295
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,590,031
Number of Sequences: 1657284
Number of extensions: 5523825
Number of successful extensions: 15193
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15189
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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