Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n02f
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium...    23   6.5  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      23   6.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.7  

>Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium
           channel protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -1

Query: 304 WYFEYFSQSSYAARTIATISLIISMSETMLLLTVSCYPKYF*VEEDGCLLIFLIRIFYRC 125
           W F  F  S      +     I SM + ML+  VSC P +      G L++  + +F   
Sbjct: 56  WNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVV--LNLFLAL 113

Query: 124 HLSIFNFTLLT 92
            LS F  + L+
Sbjct: 114 LLSNFGSSSLS 124


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 507 MGRCFCSFV 533
           +GRCFCS+V
Sbjct: 86  IGRCFCSYV 94


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -1

Query: 304  WYFEYFSQSSYAARTIATISLIISMSETMLLLTVSCYPKYF*VEEDGCLLIFLIRIFYRC 125
            W F  F  S      +     I SM + ML+  VSC P +      G L++  + +F   
Sbjct: 971  WNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVV--LNLFLAL 1028

Query: 124  HLSIFNFTLLT 92
             LS F  + L+
Sbjct: 1029 LLSNFGSSSLS 1039


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 414 HGLMPCNCVRKLTLNREKS 470
           HG  PCNC  + +L+   S
Sbjct: 439 HGCQPCNCDERGSLDNTPS 457


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 324 TVVVMSQLPTLRPTMPRIDCC 386
           +VVVM   P  RP  P ++ C
Sbjct: 22  SVVVMQPQPIERPATPMMELC 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,524
Number of Sequences: 2352
Number of extensions: 13122
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)