Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n01f
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.095
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    27   0.38 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     27   0.50 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.0  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   2.0  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   2.7  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   3.6  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   3.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   4.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.7  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.2  
AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotens...    23   8.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 0.095
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
 Frame = +3

Query: 381 ELTQSIYIPKGINVPSLAREVDWEFNPL--NVKVGSHITGGDLYGIVHENTLVKHRMLVP 554
           E     YIPKG +   ++ ++ W   P   ++   SH  GG    I    T  K R    
Sbjct: 697 EAKNDAYIPKGGDKKIISTKLQWNAKPKIGSLDNASHKPGGGDKRIESIKTDFKERAKPK 756

Query: 555 PKAKGTVTYIAPAGNYKVTDVVLE 626
             +K  +TY    G+ K+    L+
Sbjct: 757 IGSKDNITYKPGGGDVKIVHQKLD 780


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 345 FDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 452
           +DG Q  L+ I+E+ ++  +  G+++      V+W+
Sbjct: 171 YDGFQVDLRHIDEMNETNVVEVGVDLSEFYTSVEWD 206


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 192 NELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVEL 320
           N   GEI R+  D+  ++V +E+   T GDP +      SVE+
Sbjct: 547 NTQTGEI-RISRDVRFLEVDDESKEQTYGDPKIEDNPTESVEI 588


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = -2

Query: 230 VTFKTDNLTDEFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISE--PLLILLIGD--RPQT 63
           V  +TD  T     TDT+ ++      L  S D SR GE + +   L+ L  GD  R + 
Sbjct: 672 VKLETDAETAGGGATDTESVLGRAIADLVASGDDSRQGEMLRKLLALIKLFAGDVNRSRQ 731

Query: 62  AFARHF 45
             A H+
Sbjct: 732 LLASHW 737


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = +1

Query: 475 SGPTSPVEICMVLYTRT--LWSSTGCWSRPKPREQLPISHRPGTTKSQTWCWRRSS 636
           S PT+P +      T T  +W+    WS P          RP TT + T  W  S+
Sbjct: 139 SAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPRPPTTTTTT-VWTDST 193


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = +1

Query: 475 SGPTSPVEICMVLYTRT--LWSSTGCWSRPKPREQLPISHRPGTTKSQT 615
           S PT+P +      T T  +W+    WS P          RP TT + T
Sbjct: 139 SAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPRPPTTTTTT 187


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 355 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVT 266
           + +K EP+ PG  +T    P  +T  PT T
Sbjct: 84  VNAKCEPQSPGDQTTTTLRPATTTLRPTTT 113


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 355 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVT 266
           + +K EP+ PG  +T    P  +T  PT T
Sbjct: 84  VNAKCEPQSPGDQTTTTLRPATTTLRPTTT 113


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 539  QDVGPAQSQGNSYLYRTGRELQSHRRGAGD 628
            +  GP   + N Y+    +E+  HR+G+ +
Sbjct: 994  KSTGPHAVELNKYMKAARQEMSKHRKGSAE 1023


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 333 LGS-IFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 452
           LGS  +DG +  L+ ++E + S  +  G+++      V+W+
Sbjct: 170 LGSWTYDGFKVDLRHMDEKSGSNIVDVGVDLSEFYMSVEWD 210


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = -2

Query: 437  PGQGRHVDTLGDVDGLSQLVDVLE---GTLNTVKDGTQDTGTKFY 312
            PG+GR V    DV+    L DV E   G +    D + DT  K Y
Sbjct: 2124 PGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTVWKVY 2168


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/36 (22%), Positives = 20/36 (55%)
 Frame = +3

Query: 345 FDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 452
           +DG +  L+ ++E + S  +  G+++      V+W+
Sbjct: 175 YDGFKVDLRHMDEKSGSNIVDVGVDLSEFYMSVEWD 210


>AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotensin
           converting enzymeprecursor protein.
          Length = 339

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -2

Query: 143 GSDDGSRYGEDISEPLLILLIGDRPQTAFARHFELVILYPRR 18
           G    + Y  D+  PLL    GDR +  +    E  +LY  R
Sbjct: 143 GDRSPNPYVSDVDNPLLYRDGGDRNRNRYVSDVENPLLYRDR 184


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,559
Number of Sequences: 2352
Number of extensions: 15536
Number of successful extensions: 51
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)