Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m19r
(779 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondria... 241 5e-64
At3g56350.1 68416.m06266 superoxide dismutase [Mn], putative / m... 222 2e-58
At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron supero... 128 5e-30
At4g25100.3 68417.m03608 superoxide dismutase [Fe], chloroplast ... 127 7e-30
At4g25100.2 68417.m03607 superoxide dismutase [Fe], chloroplast ... 127 7e-30
At4g25100.1 68417.m03606 superoxide dismutase [Fe], chloroplast ... 127 7e-30
At5g51100.1 68418.m06335 superoxide dismutase [Fe], putative / i... 124 5e-29
At1g11170.2 68414.m01279 expressed protein contains Pfam profile... 30 2.0
At1g11170.1 68414.m01280 expressed protein contains Pfam profile... 30 2.0
At1g61240.2 68414.m06901 expressed protein contains Pfam profile... 29 2.6
At1g61240.1 68414.m06900 expressed protein contains Pfam profile... 29 2.6
At1g72300.1 68414.m08358 leucine-rich repeat transmembrane prote... 29 3.5
At3g11390.1 68416.m01387 DC1 domain-containing protein contains ... 29 4.6
At1g11620.1 68414.m01334 F-box family protein contains F-box dom... 29 4.6
At1g08040.1 68414.m00878 expressed protein contains Pfam profile... 29 4.6
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 28 6.0
At2g37890.1 68415.m04651 mitochondrial substrate carrier family ... 28 6.0
At1g32950.1 68414.m04058 subtilase family protein contains simil... 28 6.0
At1g08210.1 68414.m00907 aspartyl protease family protein contai... 28 6.0
>At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondrial
(SODA) / manganese superoxide dismutase (MSD1) identical
to manganese superoxide dismutase [Arabidopsis thaliana]
gi|3273751|gb|AAC24832
Length = 231
Score = 241 bits (589), Expect = 5e-64
Identities = 115/208 (55%), Positives = 143/208 (68%), Gaps = 5/208 (2%)
Frame = -2
Query: 730 IRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 551
+R+ G Q TLP+LPY+Y ALEP IS EIM +HH KHH Y+ N N A E+L QA K
Sbjct: 23 LRIRGI--QTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNK 80
Query: 550 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPN---GGK-PSDVLTKAVEKDFGSWDNLK 383
GD T++ L A+KFNGGGH+NHSIFW NL+P+ GG+ P L A++ FGS + L
Sbjct: 81 GDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGLV 140
Query: 382 NQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTG-LVPLFGIDVWEHAYYL 206
++S AVQGSGW WLG +K++KKL + T NQDPL G LVPL GIDVWEHAYYL
Sbjct: 141 KKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGIDVWEHAYYL 200
Query: 205 QYKNVRADYVKAIFDVANWNDISQRYEK 122
QYKNVR +Y+K ++ V NW S+ YEK
Sbjct: 201 QYKNVRPEYLKNVWKVINWKYASEVYEK 228
>At3g56350.1 68416.m06266 superoxide dismutase [Mn], putative /
manganese superoxide dismutase, putative similar to
manganese superoxide dismutase (MSD1) [Arabidopsis
thaliana] gi|3273751|gb|AAC24832
Length = 241
Score = 222 bits (542), Expect = 2e-58
Identities = 105/203 (51%), Positives = 134/203 (66%), Gaps = 6/203 (2%)
Frame = -2
Query: 712 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 533
S + +LP+LPY Y+ALEP IS EIM LHH KHH TY+ N A L A A GD ++
Sbjct: 32 SMKTASLPDLPYAYDALEPAISEEIMRLHHQKHHQTYVTQYNKALNSLRSAMADGDHSSV 91
Query: 532 INLAPALKFNGGGHINHSIFWHNLSP---NGGK-PSDVLTKAVEKDFGSWDNLKNQLSTA 365
+ L +KFNGGGH+NH+IFW NL+P GGK P D L A++ FGS + L +++
Sbjct: 92 VKLQSLIKFNGGGHVNHAIFWKNLAPVHEGGGKPPHDPLASAIDAHFGSLEGLIQKMNAE 151
Query: 364 SVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTG--LVPLFGIDVWEHAYYLQYKNV 191
AVQGSGW W G ++++K+L + T NQDPL T G LVPL GIDVWEHAYY QYKN
Sbjct: 152 GAAVQGSGWVWFGLDRELKRLVVETTANQDPL-VTKGSHLVPLIGIDVWEHAYYPQYKNA 210
Query: 190 RADYVKAIFDVANWNDISQRYEK 122
RA+Y+K I+ V NW + +EK
Sbjct: 211 RAEYLKNIWTVINWKYAADVFEK 233
>At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron
superoxide dismutase 3 (FSD3) identical to iron
superoxide dismutase 3 [Arabidopsis thaliana]
gi|3273757|gb|AAC24834
Length = 263
Score = 128 bits (308), Expect = 5e-30
Identities = 66/196 (33%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Frame = -2
Query: 682 PYEYNALEPVISREIMSLHHSKHHATYINNLNVA---EEKLAQAQAKGDIDTIINLA-PA 515
PY +ALEP +SR + +H KHH Y++NLN +++L + I N P
Sbjct: 56 PYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEELIKATYNNGNPL 115
Query: 514 LKFNGGGHI-NHSIFWHNLSPNGGK-PSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSG 341
+FN + NH FW ++ P GG P + + ++KDFGS+ N + + + A++ GSG
Sbjct: 116 PEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKFTNAALTQFGSG 175
Query: 340 WGWLGYNKQMKKLQIATCQNQ-DPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 164
W WL ++ ++L++ N +PL +P+ +DVWEH+YYL YKN RA Y+
Sbjct: 176 WVWLVLKREERRLEVVKTSNAINPL--VWDDIPIICVDVWEHSYYLDYKNDRAKYINTFL 233
Query: 163 D-VANWNDISQRYEKA 119
+ + +WN R +A
Sbjct: 234 NHLVSWNAAMSRMARA 249
>At4g25100.3 68417.m03608 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 127 bits (307), Expect = 7e-30
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 6/207 (2%)
Frame = -2
Query: 721 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 548
+ A + L P+ +ALEP +S++ + H KHH Y++NL V +L +
Sbjct: 4 SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63
Query: 547 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQ 377
I + N L FN NH FW ++ P GG KPS L +E+DF S++ +
Sbjct: 64 IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123
Query: 376 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYK 197
+ A+ G+GW WL Y+ + K+ + T +PL G PL IDVWEHAYYL ++
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL--VLGSFPLLTIDVWEHAYYLDFQ 180
Query: 196 NVRADYVKAIF-DVANWNDISQRYEKA 119
N R DY+K ++ +W +S R E A
Sbjct: 181 NRRPDYIKTFMTNLVSWEAVSARLEAA 207
>At4g25100.2 68417.m03607 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 127 bits (307), Expect = 7e-30
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 6/207 (2%)
Frame = -2
Query: 721 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 548
+ A + L P+ +ALEP +S++ + H KHH Y++NL V +L +
Sbjct: 4 SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63
Query: 547 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQ 377
I + N L FN NH FW ++ P GG KPS L +E+DF S++ +
Sbjct: 64 IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123
Query: 376 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYK 197
+ A+ G+GW WL Y+ + K+ + T +PL G PL IDVWEHAYYL ++
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL--VLGSFPLLTIDVWEHAYYLDFQ 180
Query: 196 NVRADYVKAIF-DVANWNDISQRYEKA 119
N R DY+K ++ +W +S R E A
Sbjct: 181 NRRPDYIKTFMTNLVSWEAVSARLEAA 207
>At4g25100.1 68417.m03606 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 127 bits (307), Expect = 7e-30
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 6/207 (2%)
Frame = -2
Query: 721 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 548
+ A + L P+ +ALEP +S++ + H KHH Y++NL V +L +
Sbjct: 4 SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63
Query: 547 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQ 377
I + N L FN NH FW ++ P GG KPS L +E+DF S++ +
Sbjct: 64 IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123
Query: 376 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYK 197
+ A+ G+GW WL Y+ + K+ + T +PL G PL IDVWEHAYYL ++
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL--VLGSFPLLTIDVWEHAYYLDFQ 180
Query: 196 NVRADYVKAIF-DVANWNDISQRYEKA 119
N R DY+K ++ +W +S R E A
Sbjct: 181 NRRPDYIKTFMTNLVSWEAVSARLEAA 207
>At5g51100.1 68418.m06335 superoxide dismutase [Fe], putative / iron
superoxide dismutase, putative similar to Fe-superoxide
dismutase precursor [Medicago sativa]
gi|16974682|gb|AAL32441
Length = 305
Score = 124 bits (300), Expect = 5e-29
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 25/230 (10%)
Frame = -2
Query: 730 IRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 551
+ V+G L PY +ALEP +SRE + H KHH TY+ NLN ++ L
Sbjct: 43 VAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLN--KQILGTDLDA 100
Query: 550 GDIDTII-------NLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSW 395
++ ++ N+ PA N NH FW ++ P GG KP+ L + +E+DFGS+
Sbjct: 101 LSLEEVVLLSYNKGNMLPAFN-NAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSF 159
Query: 394 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLV----------- 248
+ + +A+ + GSGW WL Y + +L +A N P + LV
Sbjct: 160 EEFLERFKSAAASNFGSGWTWLAY--KANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPL 217
Query: 247 -----PLFGIDVWEHAYYLQYKNVRADYVKAIFD-VANWNDISQRYEKAL 116
PL ID WEHAYYL ++N RA+Y+ + + +W +S R E A+
Sbjct: 218 VWDYSPLLTIDTWEHAYYLDFENRRAEYINTFMEKLVSWETVSTRLESAI 267
>At1g11170.2 68414.m01279 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 335
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = -1
Query: 506 QWW---WSHQPLDLLAQPVTKWWQA 441
+WW WS + + ++AQ TKWW A
Sbjct: 157 KWWDLEWSSKSIHIVAQNQTKWWFA 181
>At1g11170.1 68414.m01280 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 438
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = -1
Query: 506 QWW---WSHQPLDLLAQPVTKWWQA 441
+WW WS + + ++AQ TKWW A
Sbjct: 157 KWWDLEWSSKSIHIVAQNQTKWWFA 181
>At1g61240.2 68414.m06901 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 425
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = -1
Query: 506 QWW---WSHQPLDLLAQPVTKWWQA 441
QWW WS + + ++A TKWW A
Sbjct: 154 QWWDLEWSSKAIHIVAHNQTKWWFA 178
>At1g61240.1 68414.m06900 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 425
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = -1
Query: 506 QWW---WSHQPLDLLAQPVTKWWQA 441
QWW WS + + ++A TKWW A
Sbjct: 154 QWWDLEWSSKAIHIVAHNQTKWWFA 178
>At1g72300.1 68414.m08358 leucine-rich repeat transmembrane protein
kinase, putative similar to GI:3641252 from [Malus x
domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))
Length = 1095
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +1
Query: 172 LSRSRHERS------CTEDSTRAPIHRFRRAGPIQWWPAEDP 279
LSR++HE C DS R I+ F G + +W E+P
Sbjct: 851 LSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENP 892
>At3g11390.1 68416.m01387 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 270 RGSWFWHVAICNFFICLL*PSQPQP 344
+G+WF+H ICNF + L Q P
Sbjct: 241 QGNWFYHCPICNFCLDLSCSQQSVP 265
>At1g11620.1 68414.m01334 F-box family protein contains F-box domain
Pfam:PF00646
Length = 363
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -2
Query: 439 SDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKL 302
SD V+ +FG +D L +SV ++G+ + WLGYNK +L
Sbjct: 181 SDSWKVVVDTNFGGFDGLP----LSSVCLRGTPY-WLGYNKSGNEL 221
>At1g08040.1 68414.m00878 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 382
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 536 HYQPCTSLEIQWWWSHQPLDLLAQPVTKWWQA 441
HY T+ Q+ WS + + A+ TKWW A
Sbjct: 155 HYDGRTTEWDQFEWSKNAIHISAKKQTKWWYA 186
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = -2
Query: 718 GASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDID 539
G ++H E ++ EPV+ +E + H K A+ + N N + Q +K D +
Sbjct: 27 GGQEKEHVPVEKSFDSEEREPVVLKEEKPVKHEK-EASILGNKNQMDTGDVQEVSKNDFE 85
Query: 538 TIIN 527
++
Sbjct: 86 ATLD 89
>At2g37890.1 68415.m04651 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 337
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 553 KGDIDTIINLAPALKFNGGGHINHSIFWHNLSPN 452
KG T++ + P+L N + + +FWH+ PN
Sbjct: 206 KGLGATLLGVGPSLAINFAAYESMKLFWHSHRPN 239
>At1g32950.1 68414.m04058 subtilase family protein contains
similarity to SBT1 GI:1771160 from [Lycopersicon
esculentum]
Length = 773
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 402 PKSFSTALVRTSEGLPPFGDRLCQKIEWLM*PPPLNFKAG 521
P +F +A+V T+ PFG+++ + L P P ++ G
Sbjct: 573 PAAFRSAIVTTAWRTDPFGEQIAAESSSLKVPDPFDYGGG 612
>At1g08210.1 68414.m00907 aspartyl protease family protein contains
Pfam profile PF00026: Eukaryotic aspartyl protease;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) {Nicotiana tabacum}
Length = 492
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 398 GSKVFLNGFGENIRRLATIW*QVVPKDRVVDVTTTIEFQGWCKVDNGVDITFS 556
GS ++ GF R TI +V KD+VV + GW + D +++ S
Sbjct: 395 GSSIWCIGFQRMSHRRITILGDLVLKDKVVVYDLVRQRIGWAEYDCSLEVNVS 447
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,730,320
Number of Sequences: 28952
Number of extensions: 373828
Number of successful extensions: 1119
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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