Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m19f
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...   192   1e-50
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.60 
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   4.3  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    24   4.3  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   5.6  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   7.4  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.8  

>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score =  192 bits (467), Expect = 1e-50
 Identities = 84/134 (62%), Positives = 100/134 (74%)
 Frame = +3

Query: 192 RQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTII 371
           R KHTLP+LPY++ ALEPVI REIM LHH KHH  Y+ NLN AEE+L  A AK D+  II
Sbjct: 31  RSKHTLPDLPYDFGALEPVICREIMELHHQKHHNAYVTNLNAAEEQLQDAVAKQDVSKII 90

Query: 372 NLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQ 551
            L  A+KFNGGGHINHSIFW NLSP+   PS  L KA+ +DF + +N K ++  A+VAVQ
Sbjct: 91  QLGNAIKFNGGGHINHSIFWKNLSPDRSDPSAELQKALNRDFQNMENFKKEMKAAAVAVQ 150

Query: 552 GSGWGWLGYNKQMK 593
           GSGW WLGYNK+ K
Sbjct: 151 GSGWAWLGYNKKTK 164


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.60
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 273 HHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGG 407
           HH +HHA   ++    +   +   + GD  + + +A AL   GGG
Sbjct: 723 HHHQHHAAPHHHSLQQQHASSAFNSAGDARSGVAVAAALNTGGGG 767


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 177 VAGASRQKHTLPELPYEYNALEPV 248
           +AG +R  HT+ +L  EY    P+
Sbjct: 65  IAGIARVYHTIKQLKSEYKTKNPL 88


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 177 VAGASRQKHTLPELPYEYNALEPV 248
           +AG +R  HT+ +L  EY    P+
Sbjct: 65  IAGIARVYHTIKQLKSEYKTKNPL 88


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +1

Query: 343 KLKVISTPLSTLHQP*NSMVVVTSTTRSFGTTCHQMVASLL 465
           K+ ++  PL+ + Q  ++ + +T T   +   CH + A  L
Sbjct: 161 KISLVVYPLAMIAQTASAYLTLTVTLERYVAVCHPLRARAL 201


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 526 CRQLLWQYRAQAGVGLATT 582
           CR+LLW  +    VG  TT
Sbjct: 839 CRELLWLQKLMKDVGEKTT 857


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
 Frame = +2

Query: 155 KDWIIDSSC---RCFSPEAYFARASVRVQCTGAGH*P*NH 265
           + W     C   RC     + + +S R QC   G  P  H
Sbjct: 204 QSWASPDGCIVYRCVKENGFLSISSSRKQCPAVGDCPDQH 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,652
Number of Sequences: 2352
Number of extensions: 12704
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)