Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m19f
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L34276-1|AAA28694.1|  217|Drosophila melanogaster manganese supe...   200   9e-52
BT004505-1|AAO42669.1|  217|Drosophila melanogaster GH02759p pro...   200   9e-52
AE013599-2339|AAF57955.1|  217|Drosophila melanogaster CG8905-PA...   200   9e-52
L18947-1|AAA20533.1|  217|Drosophila melanogaster Mn-superoxide ...   200   2e-51
X64062-1|CAA45418.1|  143|Drosophila melanogaster superoxide dis...   167   1e-41

>L34276-1|AAA28694.1|  217|Drosophila melanogaster manganese
           superoxide dismutase protein.
          Length = 217

 Score =  200 bits (489), Expect = 9e-52
 Identities = 87/134 (64%), Positives = 107/134 (79%)
 Frame = +3

Query: 186 ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDT 365
           A R KHTLP+LPY+Y ALEP+I REIM LHH KHH TY+NNLN AEE+L +A++K D   
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTK 73

Query: 366 IINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVA 545
           +I LAPAL+FNGGGHINH+IFW NLSPN  +PSD L KA+E  + S +  K +L+T +VA
Sbjct: 74  LIQLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVA 133

Query: 546 VQGSGWGWLGYNKQ 587
           VQGSGWGWLG+NK+
Sbjct: 134 VQGSGWGWLGFNKK 147


>BT004505-1|AAO42669.1|  217|Drosophila melanogaster GH02759p
           protein.
          Length = 217

 Score =  200 bits (489), Expect = 9e-52
 Identities = 87/134 (64%), Positives = 107/134 (79%)
 Frame = +3

Query: 186 ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDT 365
           A R KHTLP+LPY+Y ALEP+I REIM LHH KHH TY+NNLN AEE+L +A++K D   
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTK 73

Query: 366 IINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVA 545
           +I LAPAL+FNGGGHINH+IFW NLSPN  +PSD L KA+E  + S +  K +L+T +VA
Sbjct: 74  LIQLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVA 133

Query: 546 VQGSGWGWLGYNKQ 587
           VQGSGWGWLG+NK+
Sbjct: 134 VQGSGWGWLGFNKK 147


>AE013599-2339|AAF57955.1|  217|Drosophila melanogaster CG8905-PA
           protein.
          Length = 217

 Score =  200 bits (489), Expect = 9e-52
 Identities = 87/134 (64%), Positives = 107/134 (79%)
 Frame = +3

Query: 186 ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDT 365
           A R KHTLP+LPY+Y ALEP+I REIM LHH KHH TY+NNLN AEE+L +A++K D   
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTK 73

Query: 366 IINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVA 545
           +I LAPAL+FNGGGHINH+IFW NLSPN  +PSD L KA+E  + S +  K +L+T +VA
Sbjct: 74  LIQLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVA 133

Query: 546 VQGSGWGWLGYNKQ 587
           VQGSGWGWLG+NK+
Sbjct: 134 VQGSGWGWLGFNKK 147


>L18947-1|AAA20533.1|  217|Drosophila melanogaster Mn-superoxide
           dismutase protein.
          Length = 217

 Score =  200 bits (487), Expect = 2e-51
 Identities = 86/132 (65%), Positives = 106/132 (80%)
 Frame = +3

Query: 192 RQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTII 371
           R KHTLP+LPY+Y ALEP+I REIM LHH KHH TY+NNLN AEE+L +A++K D   +I
Sbjct: 16  RGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLI 75

Query: 372 NLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQ 551
            LAPAL+FNGGGHINH+IFW NLSPN  +PSD L KA+E  + S +  K +L+T +VAVQ
Sbjct: 76  QLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQ 135

Query: 552 GSGWGWLGYNKQ 587
           GSGWGWLG+NK+
Sbjct: 136 GSGWGWLGFNKK 147


>X64062-1|CAA45418.1|  143|Drosophila melanogaster superoxide
           dismutase (Mn type) protein.
          Length = 143

 Score =  167 bits (406), Expect = 1e-41
 Identities = 71/114 (62%), Positives = 90/114 (78%)
 Frame = +3

Query: 246 VISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSI 425
           +I REIM LHH KHH TY+NNLN AEE+L +A++K D   +I LAPAL+FNGGGHINH+I
Sbjct: 1   IICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTI 60

Query: 426 FWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQ 587
           FW NLSPN  +PSD L KA+E  + S +  K +++T +VAVQGSGWGWLG+NK+
Sbjct: 61  FWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKEVTTLTVAVQGSGWGWLGFNKK 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,183,478
Number of Sequences: 53049
Number of extensions: 578065
Number of successful extensions: 1388
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)