Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m18r
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-11|CAB16517.1| 154|Caenorhabditis elegans Hypothetical p... 241 1e-64
U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical pr... 28 4.3
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 27 5.7
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 27 5.7
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 27 5.7
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 27 5.7
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 27 7.6
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 7.6
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 27 10.0
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 27 10.0
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 27 10.0
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 27 10.0
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 27 10.0
>Z99281-11|CAB16517.1| 154|Caenorhabditis elegans Hypothetical
protein Y57G11C.16 protein.
Length = 154
Score = 241 bits (591), Expect = 1e-64
Identities = 107/145 (73%), Positives = 129/145 (88%)
Frame = -2
Query: 443 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 264
MSL+IP+KFQHI R+MNTNIDG RKV +A+TAIKGVGRR++ + +KAD+D++KRAGE T
Sbjct: 1 MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60
Query: 263 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 84
EE+ +KI+TIM NP QYKIP+WFLNRQKDI DGK QL S+ +D+KLREDLER+KKIR H
Sbjct: 61 EEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLH 120
Query: 83 RGMRHYWGLRVRGQHTKTTGRRGRT 9
RG+RHYWGLRVRGQHTKTTGR+GRT
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRKGRT 145
>U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical
protein C09B9.7 protein.
Length = 913
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 239 TIMSNPRQYKIPDWFLNRQK-DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 63
+I NP + + LNR D KY SS+++ ++ DLE+LKKI + ++ Y
Sbjct: 111 SIRDNPVSQSLANILLNRDTAPYYDYKY---LSSDIELMVK-DLEKLKKINKEKTLKMY- 165
Query: 62 GLRVRG 45
GL G
Sbjct: 166 GLLAHG 171
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 101 KKIRAHRGMRHYWGLRVRGQHTKTT 27
K + AH RH+ G+ + GQH +T
Sbjct: 523 KVLDAHSSSRHHSGMSIHGQHPPST 547
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 101 KKIRAHRGMRHYWGLRVRGQHTKTT 27
K + AH RH+ G+ + GQH +T
Sbjct: 500 KVLDAHSSSRHHSGMSIHGQHPPST 524
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 101 KKIRAHRGMRHYWGLRVRGQHTKTT 27
K + AH RH+ G+ + GQH +T
Sbjct: 662 KVLDAHSSSRHHSGMSIHGQHPPST 686
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 101 KKIRAHRGMRHYWGLRVRGQHTKTT 27
K + AH RH+ G+ + GQH +T
Sbjct: 611 KVLDAHSSSRHHSGMSIHGQHPPST 635
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -2
Query: 227 NPRQYKIPDWFLNRQKDIVDGKYS-QLTSSNLDSKLREDL 111
NP YK+ D++ N+ +++ K + +L S++L K +++L
Sbjct: 40 NPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNL 79
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 27.1 bits (57), Expect = 7.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 360 CDDGYQRCWPEVLQHCS 310
C + YQ CWP +L CS
Sbjct: 1512 CREYYQICWPPILLACS 1528
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 26.6 bits (56), Expect = 10.0
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -2
Query: 443 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 264
+ L P Q I +NT +GK K + +IK N + KAD D DK G
Sbjct: 116 LDLTTPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWD-DKFDGMSV 174
Query: 263 EEE 255
E+
Sbjct: 175 SEQ 177
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 26.6 bits (56), Expect = 10.0
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = -2
Query: 314 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 135
VLK+ I L KR + E+E K +T+ K G + T + L
Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104
Query: 134 DSKLREDLERLKKIR 90
D+ + + + KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 26.6 bits (56), Expect = 10.0
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = -2
Query: 314 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 135
VLK+ I L KR + E+E K +T+ K G + T + L
Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104
Query: 134 DSKLREDLERLKKIR 90
D+ + + + KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 26.6 bits (56), Expect = 10.0
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = -2
Query: 314 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 135
VLK+ I L KR + E+E K +T+ K G + T + L
Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104
Query: 134 DSKLREDLERLKKIR 90
D+ + + + KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 26.6 bits (56), Expect = 10.0
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -2
Query: 443 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 264
+ L P Q I +NT +GK K + +IK N + KAD D DK G
Sbjct: 116 LDLTTPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWD-DKFDGMSV 174
Query: 263 EEE 255
E+
Sbjct: 175 SEQ 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,033,027
Number of Sequences: 27780
Number of extensions: 255170
Number of successful extensions: 804
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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