Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m17r
(708 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 127 1e-31
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 119 2e-29
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 119 3e-29
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 1.4
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 2.4
EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport pe... 23 3.2
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 5.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 5.6
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 9.8
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase 1
protein.
Length = 534
Score = 127 bits (306), Expect = 1e-31
Identities = 83/245 (33%), Positives = 125/245 (51%), Gaps = 16/245 (6%)
Frame = -1
Query: 690 FASIPASAIKGVRIPFLQMSGNTXFQVMADFDLLYDCTWPTTALTNPGLWPYTLHHESIQ 511
FA++ +++ GVR P+L++ GN F +M + LYD T T L+NP LWPYT++
Sbjct: 289 FANLTDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTI-TAPLSNPPLWPYTMYFRMPH 347
Query: 510 DCI--IPPCPTASIPGPW--VLPMISWR-DLNN---FP-CSMVDGCFFTPDRTDEEGWFK 358
C + CPT S W VL + R D N P C+MVD C + + ++
Sbjct: 348 RCHGNLQSCPTRS-HAVWEMVLNELDRREDPTNDEYLPGCAMVDSC---SNILTGDQFYN 403
Query: 357 FILTNFERHYLGNRAPFGFFVHEWFISSNPAIKRAFVRFMD-IINNLNDVFMVNSAEVID 181
F+ NF+RHY NRAP G + H ++ +NP AF+ ++D I+ N NDV+ V +VI
Sbjct: 404 FLNHNFDRHYEENRAPLGLYFHAAWLKNNPEFLDAFLYWVDEILANHNDVYFVTMTQVIQ 463
Query: 180 WVKNPVPI------DRYRQQQCKFTMPSICRPSFCGPLTGTHNQLSYYMTICNTCPRNYP 19
W++NP I + +R++ P P C + + + C CP NYP
Sbjct: 464 WIQNPRTITESKNFEPWREKCVVEGNPHCWVPHSCKLTSKEVPGETINLQTCVRCPNNYP 523
Query: 18 WVGNP 4
WV +P
Sbjct: 524 WVNDP 528
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 119 bits (287), Expect = 2e-29
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 15/244 (6%)
Frame = -1
Query: 690 FASIPASAIKGVRIPFLQMSGNTXFQVMADFDLLYDCTWPTTALTNPGLWPYTLHHESIQ 511
FA+I +I GVR P+L++ GN F++MAD +YD + T +L +WPYTL+
Sbjct: 281 FANITDGSIIGVRAPYLRVGGNKQFEMMADQFFVYDASI-TASLGRVPIWPYTLYFRMPH 339
Query: 510 DCI--IPPCPTASIPGPWVLPM--ISWRDLNNFP-----CSMVDGCFFTPDRTDEEGWFK 358
C CP+ S P W + M + RD F C MVD C + +T E+ + +
Sbjct: 340 KCNGNAHNCPSRSHP-VWEIVMNELDRRDDPTFDESLPGCHMVDSC--SNIQTGEQ-FAR 395
Query: 357 FILTNFERHYLGNRAPFGFFVHEWFISSNPAIKRAFVRFMDIINNLNDVFMVNSAEVIDW 178
+ NF RH NRAP G H ++ S K ++F++ + NDV+ V + +VI W
Sbjct: 396 LLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQRNDVYFVTNLQVIQW 455
Query: 177 VKNPVPIDRYR-----QQQCKFTMPSICR-PSFCGPLTGTHNQLSYYMTICNTCPRNYPW 16
++NP ++ R +++C C P+ C T + + C CP NYPW
Sbjct: 456 MQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPW 515
Query: 15 VGNP 4
+ +P
Sbjct: 516 ILDP 519
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase 2A
protein.
Length = 535
Score = 119 bits (286), Expect = 3e-29
Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 15/244 (6%)
Frame = -1
Query: 690 FASIPASAIKGVRIPFLQMSGNTXFQVMADFDLLYDCTWPTTALTNPGLWPYTLHHESIQ 511
FA+I +I GVR P+L++ GN F++MAD +YD + T +L +WPYTL+
Sbjct: 288 FANITDGSIIGVRAPYLRVGGNKQFEMMADQFFVYDASI-TASLGRVPIWPYTLYFRMPH 346
Query: 510 DCI--IPPCPTASIPGPWVLPM--ISWRDLNNFP-----CSMVDGCFFTPDRTDEEGWFK 358
C CP+ S P W + M + RD F C MVD C + +T E+ + +
Sbjct: 347 KCNGNAHNCPSRSHP-VWEIVMNELDRRDDPTFDESLPGCHMVDSC--SNIQTGEQ-FAR 402
Query: 357 FILTNFERHYLGNRAPFGFFVHEWFISSNPAIKRAFVRFMDIINNLNDVFMVNSAEVIDW 178
+ NF RH NRAP G H ++ S K ++F++ + NDV+ V + +VI W
Sbjct: 403 LLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQRNDVYFVTNLQVIQW 462
Query: 177 VKNPVPIDRYR-----QQQCKFTMPSICR-PSFCGPLTGTHNQLSYYMTICNTCPRNYPW 16
++NP ++ R +++C C P+ C T + + C CP NYPW
Sbjct: 463 MQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPW 522
Query: 15 VGNP 4
+ P
Sbjct: 523 ILEP 526
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 287 HSWTKNPNGALFPR*CLSKL--VRINLNHPSSSVRS 388
H W K+P GA P S L R + ++P+ S RS
Sbjct: 65 HPWKKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRS 100
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 525 HESIQDCIIPPC 490
HE+I DC + PC
Sbjct: 66 HENINDCKVNPC 77
>EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport
peptide isoform C protein.
Length = 136
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/41 (29%), Positives = 15/41 (36%)
Frame = -1
Query: 432 NNFPCSMVDGCFFTPDRTDEEGWFKFILTNFERHYLGNRAP 310
N F GC T R+DEE + + LG P
Sbjct: 88 NCFTTDYFKGCIDTLQRSDEEAQIQLWIKQIRGAELGGLGP 128
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 380 PTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNG 285
P + ++ P S + +G R+DSS TNG
Sbjct: 749 PVGTNPHDINNPLSVNQLTGQCVRNDSSDTNG 780
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 380 PTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNG 285
P + ++ P S + +G R+DSS TNG
Sbjct: 641 PVGTNPHDINNPLSVNQLTGQCVRNDSSDTNG 672
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 382 TVWREEATIHHGAREIV 432
T REE IHH AR V
Sbjct: 358 TQLREEGWIHHLARHAV 374
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,812
Number of Sequences: 336
Number of extensions: 4443
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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