Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m17f
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   174   4e-46
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   151   6e-39
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   150   8e-39
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.51 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.1  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   6.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.3  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  174 bits (424), Expect = 4e-46
 Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 3/179 (1%)
 Frame = +1

Query: 91  ATPCDEEACKLPDCRCSS--TNIPGGLRARDTPQFVTVTFDDGINVINIETYREVLYG-R 261
           A PCD   C LPDC CS   T IPG L ++D PQ +T+TFDD IN  NIE Y+E+  G R
Sbjct: 160 APPCDPAVCVLPDCFCSEDGTTIPGDLPSKDVPQMITITFDDAINNNNIELYKEIFNGKR 219

Query: 262 SNSNRCPAGATFYVSHEYTNYQLVNELYNRGFEIALHSISHRTPQAFWADATYQNLVQEI 441
            N N C   ATF+VSH+YTNY  V E++ +G EIA+HSI+H   + FW++AT  +  +E+
Sbjct: 220 KNPNGCDIKATFFVSHKYTNYSAVQEMHRKGHEIAVHSITHNDDERFWSNATVDDWAKEM 279

Query: 442 GDQKRQMAHFASIPASAIKGVRIPFLQMSGNTSFQVMADFDLLYDCTWPTTALTNPGLW 618
              +     FA++  +++ GVR P+L++ GN  F +M +   LYD T  T  L+NP LW
Sbjct: 280 AGMRIIAEKFANLTDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDST-ITAPLSNPPLW 337


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  151 bits (365), Expect = 6e-39
 Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 3/179 (1%)
 Frame = +1

Query: 91  ATPCDEEACKLPDCRCSS--TNIPGGLRARDTPQFVTVTFDDGINVINIETYREVLYG-R 261
           A  CD   C LPDC CS+  T IPG L   + PQ +T+TF+  +NV NI+ Y E+  G R
Sbjct: 152 ALDCDPTQCVLPDCFCSADGTRIPGQLEPANVPQMITLTFNGAVNVDNIDLYEEIFNGNR 211

Query: 262 SNSNRCPAGATFYVSHEYTNYQLVNELYNRGFEIALHSISHRTPQAFWADATYQNLVQEI 441
           +N N C    TF+VSH+YTNY  V +L+ RG EIA+ S++H+    +W+  +Y + + E+
Sbjct: 212 ANPNGCQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVFSLTHKEDPNYWSQGSYDDWLAEM 271

Query: 442 GDQKRQMAHFASIPASAIKGVRIPFLQMSGNTSFQVMADFDLLYDCTWPTTALTNPGLW 618
              +  +  FA+I   +I GVR P+L++ GN  F++MAD   +YD +  T +L    +W
Sbjct: 272 AGARLIVERFANITDGSIIGVRAPYLRVGGNKQFEMMADQFFVYDAS-ITASLGRVPIW 329



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 265 NSNRCPAGATFYVSHEYTNYQLVNEL 342
           NSNR P G  F+ S   +  +   EL
Sbjct: 406 NSNRAPLGLHFHASWLKSKKEFKEEL 431


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  150 bits (364), Expect = 8e-39
 Identities = 71/179 (39%), Positives = 108/179 (60%), Gaps = 3/179 (1%)
 Frame = +1

Query: 91  ATPCDEEACKLPDCRCSS--TNIPGGLRARDTPQFVTVTFDDGINVINIETYREVLYG-R 261
           A  CD   C LPDC CS+  T IPG L   + PQ +T+TF+  +N+ NI+ Y E+  G R
Sbjct: 159 APDCDPTQCVLPDCFCSADGTRIPGQLEPANVPQMITLTFNGAVNIDNIDLYEEIFNGNR 218

Query: 262 SNSNRCPAGATFYVSHEYTNYQLVNELYNRGFEIALHSISHRTPQAFWADATYQNLVQEI 441
           +N N C    TF+VSH+YTNY  V +L+ RG EIA+ S++H+    +W+  +Y + + E+
Sbjct: 219 ANPNGCQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVFSLTHKEDPNYWSQGSYDDWLAEM 278

Query: 442 GDQKRQMAHFASIPASAIKGVRIPFLQMSGNTSFQVMADFDLLYDCTWPTTALTNPGLW 618
              +  +  FA+I   +I GVR P+L++ GN  F++MAD   +YD +  T +L    +W
Sbjct: 279 AGARLIVERFANITDGSIIGVRAPYLRVGGNKQFEMMADQFFVYDAS-ITASLGRVPIW 336



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 265 NSNRCPAGATFYVSHEYTNYQLVNEL 342
           NSNR P G  F+ S   +  +   EL
Sbjct: 413 NSNRAPLGLHFHASWLKSKKEFKEEL 438


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 281 QPELPSTSATSTQTISWSTNSTIEASRLLYIRSVTEPPRR 400
           QP++ S S T+T T S ++N    +   + I+     PR+
Sbjct: 420 QPQITSPSNTNTSTSSTNSNKPNSSDLNMLIKETMPLPRK 459


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 436 PGPSFDTWHQPRTP 395
           PGP++ TW   +TP
Sbjct: 300 PGPTYSTWSTVQTP 313


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 91  PMAAQCQEPQPRGAKSTKPTASSSRYSES 5
           P      EPQP     ++PT +S + +ES
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQASEQPTES 421


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 288 SGWAAVRVAAAVKDL 244
           +G+A+V  AAAVKD+
Sbjct: 105 NGYASVVAAAAVKDV 119


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 184 QFVTVTFDDGINVINIETYREVLYGRSN 267
           Q + +TF  G+NV++   +   +  R N
Sbjct: 636 QILLITFQSGLNVVSCINFPLGVLDRGN 663


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,408
Number of Sequences: 336
Number of extensions: 3414
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)