Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m17f
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 85 3e-17
U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical p... 83 2e-16
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 83 2e-16
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z92825-8|CAB07316.2| 469|Caenorhabditis elegans Hypothetical pr... 34 0.071
Z75955-18|CAB00126.2| 469|Caenorhabditis elegans Hypothetical p... 34 0.071
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 31 0.50
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 31 0.50
Z92813-2|CAB07284.1| 353|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 29 2.7
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 29 2.7
U64852-7|AAB04970.1| 452|Caenorhabditis elegans Hypothetical pr... 29 2.7
U40060-9|AAA81147.1| 111|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF068708-2|AAC17753.1| 464|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 6.2
U50198-1|AAA91259.2| 529|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 8.2
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 8.2
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 8.2
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 27 8.2
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 85.4 bits (202), Expect = 3e-17
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Frame = +1
Query: 157 GGLRARDTPQFVTVTFDDGINVINIETYREV-------------------------LYGR 261
G LR +TPQFV +TFDD +N Y+++ L
Sbjct: 1496 GCLRPDETPQFVVLTFDDAVNGKTFSDYKKLFENDVLKSFKFKIKNFKKVIPNTLSLKNT 1555
Query: 262 SNSNRCPAGATFYVSHEYTNYQLVNELYNRGFEIALHSISHRTPQAFWADATYQNLVQEI 441
N N C ATF++SHE+TNY VN L + EIA +SISH + + +A + E+
Sbjct: 1556 INPNGCDVKATFFISHEWTNYDAVNWLVQKNMEIASNSISHESLE----NANTNRWLNEM 1611
Query: 442 GDQKRQMAHFASIPASAIKGVRIPFLQMSGNTSFQVMADFDLLYDCTWPTTALTNPGL 615
Q+R +A F P I G+R P L + G+ F++M + L W + NPG+
Sbjct: 1612 DGQRRILAKFGGAPEEEIVGIRSPQLALGGDNQFEMMIGAEFL----WDNSMSANPGI 1665
>U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical
protein F48E3.8c protein.
Length = 358
Score = 83.0 bits (196), Expect = 2e-16
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 88 LATPCDEE-ACKLPDCRCSSTNI--PGGLRARDTPQFVTVTFDDGINVINIETYREVLYG 258
L T C + +C+LP C C+ST P + PQ V ++FDD I I T + + G
Sbjct: 21 LLTECPRDGSCRLPSCFCTSTGKIPPNNFDTKQVPQMVMLSFDDPITDRIINTLKSLFSG 80
Query: 259 R-SNSNRCPAGATFYVSHEYTNYQLVNELYNRGFEIALHSISHRTPQAFWADATYQNLVQ 435
N N C TF+VSH++ NY L++ EI ++SI+ + T + +
Sbjct: 81 SIRNPNGCAIKGTFFVSHQWNNYDQSLWLHSTNHEIGVNSITRED----LSGRTQERWYK 136
Query: 436 EIGDQKRQMAHFASIPASAIKGVRIPFLQMSGNTSFQVMADFDLLYD 576
E + +A F+ I S I G R P L++ G+ +++M++ + +D
Sbjct: 137 EQKGMRETLAEFSFIDRSHIIGTRAPELKIGGDAQYRMMSENNFTFD 183
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 83.0 bits (196), Expect = 2e-16
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 88 LATPCDEE-ACKLPDCRCSSTNI--PGGLRARDTPQFVTVTFDDGINVINIETYREVLYG 258
L T C + +C+LP C C+ST P + PQ V ++FDD I I T + + G
Sbjct: 2090 LLTECPRDGSCRLPSCFCTSTGKIPPNNFDTKQVPQMVMLSFDDPITDRIINTLKSLFSG 2149
Query: 259 R-SNSNRCPAGATFYVSHEYTNYQLVNELYNRGFEIALHSISHRTPQAFWADATYQNLVQ 435
N N C TF+VSH++ NY L++ EI ++SI+ + T + +
Sbjct: 2150 SIRNPNGCAIKGTFFVSHQWNNYDQSLWLHSTNHEIGVNSITRED----LSGRTQERWYK 2205
Query: 436 EIGDQKRQMAHFASIPASAIKGVRIPFLQMSGNTSFQVMADFDLLYD 576
E + +A F+ I S I G R P L++ G+ +++M++ + +D
Sbjct: 2206 EQKGMRETLAEFSFIDRSHIIGTRAPELKIGGDAQYRMMSENNFTFD 2252
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical protein
F48E3.8b protein.
Length = 1299
Score = 83.0 bits (196), Expect = 2e-16
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 88 LATPCDEE-ACKLPDCRCSSTNI--PGGLRARDTPQFVTVTFDDGINVINIETYREVLYG 258
L T C + +C+LP C C+ST P + PQ V ++FDD I I T + + G
Sbjct: 962 LLTECPRDGSCRLPSCFCTSTGKIPPNNFDTKQVPQMVMLSFDDPITDRIINTLKSLFSG 1021
Query: 259 R-SNSNRCPAGATFYVSHEYTNYQLVNELYNRGFEIALHSISHRTPQAFWADATYQNLVQ 435
N N C TF+VSH++ NY L++ EI ++SI+ + T + +
Sbjct: 1022 SIRNPNGCAIKGTFFVSHQWNNYDQSLWLHSTNHEIGVNSITRED----LSGRTQERWYK 1077
Query: 436 EIGDQKRQMAHFASIPASAIKGVRIPFLQMSGNTSFQVMADFDLLYD 576
E + +A F+ I S I G R P L++ G+ +++M++ + +D
Sbjct: 1078 EQKGMRETLAEFSFIDRSHIIGTRAPELKIGGDAQYRMMSENNFTFD 1124
>Z92825-8|CAB07316.2| 469|Caenorhabditis elegans Hypothetical
protein C13C4.2 protein.
Length = 469
Score = 34.3 bits (75), Expect = 0.071
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 359 RLLYIRSVTEPPRRSGLMPRIKTWSRKLEIRKDKWRILLASPLVQLKVCVSP 514
+L ++ S EP RSG+ P + RKLE D +L+ + + LK C SP
Sbjct: 200 KLTFVESKVEPLHRSGMPPGYRD-IRKLEEILDSKPVLVVTDIPNLKFCPSP 250
>Z75955-18|CAB00126.2| 469|Caenorhabditis elegans Hypothetical
protein C13C4.2 protein.
Length = 469
Score = 34.3 bits (75), Expect = 0.071
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 359 RLLYIRSVTEPPRRSGLMPRIKTWSRKLEIRKDKWRILLASPLVQLKVCVSP 514
+L ++ S EP RSG+ P + RKLE D +L+ + + LK C SP
Sbjct: 200 KLTFVESKVEPLHRSGMPPGYRD-IRKLEEILDSKPVLVVTDIPNLKFCPSP 250
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = -1
Query: 236 VSMLMTLIPSSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAAT 57
++M +L+ S++ V++ SL ++P G++ EH+ S S SS A+ S R++AT
Sbjct: 363 ITMAQSLLSHSSINVSS---SLGQHPAGVITREHVTSSSASGSS----ASPSRYSRSSAT 415
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = -1
Query: 236 VSMLMTLIPSSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAAT 57
++M +L+ S++ V++ SL ++P G++ EH+ S S SS A+ S R++AT
Sbjct: 493 ITMAQSLLSHSSINVSS---SLGQHPAGVITREHVTSSSASGSS----ASPSRYSRSSAT 545
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = -1
Query: 236 VSMLMTLIPSSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAAT 57
++M +L+ S++ V++ SL ++P G++ EH+ S S SS A+ S R++AT
Sbjct: 363 ITMAQSLLSHSSINVSS---SLGQHPAGVITREHVTSSSASGSS----ASPSRYSRSSAT 415
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = -1
Query: 236 VSMLMTLIPSSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAAT 57
++M +L+ S++ V++ SL ++P G++ EH+ S S SS A+ S R++AT
Sbjct: 493 ITMAQSLLSHSSINVSS---SLGQHPAGVITREHVTSSSASGSS----ASPSRYSRSSAT 545
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = -1
Query: 236 VSMLMTLIPSSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAAT 57
++M +L+ S++ V++ SL ++P G++ EH+ S S SS A+ S R++AT
Sbjct: 493 ITMAQSLLSHSSINVSS---SLGQHPAGVITREHVTSSSASGSS----ASPSRYSRSSAT 545
>Z92813-2|CAB07284.1| 353|Caenorhabditis elegans Hypothetical
protein T28A8.2 protein.
Length = 353
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 295 FYVSHEYTNYQLVNELYNRGFEIALHSISHRTPQAFWADATYQNLVQEI 441
F S+ + QL N ++ + + + HRTP F ++TYQ ++ +
Sbjct: 46 FISSNFAVSKQLGNNIFELASILGISRVLHRTPVIFLQNSTYQYMLNRV 94
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -1
Query: 212 PSSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAATRS 51
PS++ T + LA +++DE+ ++G SS H GSS + + R+
Sbjct: 418 PSNDTTAEDSRNFLASRLGQVMIDENKKAGGSNGSSQHHNQQGSSYTKTSFERT 471
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -1
Query: 212 PSSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAATRS 51
PS++ T + LA +++DE+ ++G SS H GSS + + R+
Sbjct: 418 PSNDTTAEDSRNFLASRLGQVMIDENKKAGGSNGSSQHHNQQGSSYTKTSFERT 471
>U64852-7|AAB04970.1| 452|Caenorhabditis elegans Hypothetical
protein W01A11.1 protein.
Length = 452
Score = 29.1 bits (62), Expect = 2.7
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +1
Query: 157 GGLRARDTPQ----FVTVTFDDGINVINIETYREVLYGRSNSNRCPAGATFYVSHEYTNY 324
GGL R T V + + +G V + YRE+ R RC A YVS +
Sbjct: 344 GGLNKRFTNDELLTIVMIYWTNGNIVSSQRFYREMFLDR----RCEALGKRYVSTPTAHA 399
Query: 325 QLVNELYNR-GFEIALHS--ISHRT 390
+NELY+R E++ HS I+H T
Sbjct: 400 SGLNELYDRTPIEVSRHSYNITHYT 424
>U40060-9|AAA81147.1| 111|Caenorhabditis elegans Hypothetical
protein F38B6.1 protein.
Length = 111
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 464 RILLASPLVQLKVCVSPSFRCPVTQVSRLWQILTYCTTAP 583
+I A+P+ Q++ +PS P+ + +LW +L + TT+P
Sbjct: 30 KIFNAAPITQIE---NPSRPGPIKEYRKLWIVLIFKTTSP 66
>AF068708-2|AAC17753.1| 464|Caenorhabditis elegans Hypothetical
protein C18G1.6 protein.
Length = 464
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 202 FDDGINV-INIETYREVLYGRSNSNRCPAGATFYVSHEY 315
F +GI + N++ Y E L G S PA FYV+H +
Sbjct: 93 FYEGIEIPTNLKVYGESLEGSCPSTYGPAKPCFYVAHTF 131
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 94 TPCDEEACKLPDCRCSSTNIP 156
T C EA L CRC ST++P
Sbjct: 53 TECVSEAICLGTCRCKSTHVP 73
>U50198-1|AAA91259.2| 529|Caenorhabditis elegans Hypothetical
protein R04B3.1 protein.
Length = 529
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 543 ETCVTGHLKEGDTHTFNCTSGDASKMRHLSFLISNFLDQVLIRGISPE 400
E+CV +L+ D +F+ T G K RH S D+ +I G +P+
Sbjct: 258 ESCVAKNLEGMDLESFHKTEGADEKSRHEGNTKSITDDEHVISGDTPD 305
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 209 SSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAATRS 51
SS+ T + LA +++DE+ ++G SS H GSS + + R+
Sbjct: 1159 SSDTTAEDSRNFLASRLGQVMIDENKKAGGSNGSSQHHNQQGSSYTKTSFERT 1211
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 209 SSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAATRS 51
SS+ T + LA +++DE+ ++G SS H GSS + + R+
Sbjct: 506 SSDTTAEDSRNFLASRLGQVMIDENKKAGGSNGSSQHHNQQGSSYTKTSFERT 558
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 209 SSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAATRS 51
SS+ T + LA +++DE+ ++G SS H GSS + + R+
Sbjct: 1159 SSDTTAEDSRNFLASRLGQVMIDENKKAGGSNGSSQHHNQQGSSYTKTSFERT 1211
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 209 SSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSSHGVANGSSVPRAAATRS 51
SS+ T + LA +++DE+ ++G SS H GSS + + R+
Sbjct: 506 SSDTTAEDSRNFLASRLGQVMIDENKKAGGSNGSSQHHNQQGSSYTKTSFERT 558
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 307 HEYTNYQLVNELYNR-GFEIALHSI-SHRTPQAFWADATYQNLVQEIGDQKRQ 459
H T +L++ L + EI L I HRTP+A T +V+E D++R+
Sbjct: 1667 HSLTAMRLIDHLSDLLEVEIPLKLIFEHRTPEALEKALTRSEVVEEREDERRE 1719
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -1
Query: 209 SSNVTVTNCGVSLARNPPGILVDEHLQSGSLQASSS----HGVANGSSVPRAAATRSKEH 42
SS +T+ SLAR GIL+ + L GSL A+ + + NG ++ R AT
Sbjct: 34 SSLQQMTDDFSSLARLLNGILLQQLLTDGSLVATETIADLFNIPNGKAIERVIATDVHVK 93
Query: 41 KTDSL 27
T L
Sbjct: 94 STSKL 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,328,987
Number of Sequences: 27780
Number of extensions: 329333
Number of successful extensions: 1115
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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