Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m16r
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    44   9e-05
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    38   0.005
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    37   0.011
Z99942-6|CAI79199.1|  119|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z35598-7|CAA84650.2|  325|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical ...    28   6.6  
U41270-2|AAA82440.1|  298|Caenorhabditis elegans Cell-death-rela...    27   8.7  
AY303578-1|AAP57300.1|  298|Caenorhabditis elegans cell death-re...    27   8.7  
AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical...    27   8.7  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    27   8.7  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 44.0 bits (99), Expect = 9e-05
 Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
 Frame = -3

Query: 523 HPLYDESIQQIVQPHDIGLIKFGR-SLVFNDYVQPIRLQSSYHKDYNYD-GYRLTATGWG 350
           +PLY +     +  HDI +++     + FN+Y QPI L S   KD+ Y  G +   +GWG
Sbjct: 107 YPLYKD-----IFSHDIAILEIPYPGIEFNEYAQPICLPS---KDFVYTPGRQCVVSGWG 158

Query: 349 RTWTNGTAPENMNWVFLRGVTNAFCSEIFVINNIVQDSTICASGYNVTSQSTCQGDSGG 173
                    E +    +  +    C     I + +  S  CA GY      +CQGDSGG
Sbjct: 159 SMGLRYA--ERLQAALIPIINRFDCVNSSQIYSSMSRSAFCA-GYLEGGIDSCQGDSGG 214


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
 Frame = -3

Query: 481 HDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWT-NGTAPENMNWV 305
           HD  +++  + + F++ V+PI L     +   Y    L   GWGR +  +G     +   
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLP----RPNMYYTKSLAVPGWGRIFNESGPLIHEIPMR 198

Query: 304 FLRGVTNAFCSEIFVINNIVQDSTICASGYNVTSQS---TCQGDSGGGLTXXXXXXXXXX 134
             R     +   +        D  ICA+  NV++ S   TC GDSGGGL           
Sbjct: 199 IDRDCKRPWSDRL----PADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAF 254

Query: 133 XGISSFVSSTGCHTDXPCRF 74
               +   + GC ++   RF
Sbjct: 255 LIAITSFGTRGCPSNMLARF 274


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -3

Query: 361 TGWGRTWTNGT-APENMNWVFLRGVTNAFCSEI-FVINNIVQDSTICASGYNVTSQSTCQ 188
           TGWG T    + +   +  + +  ++  FCS +   I  I   S +CA GY+     +CQ
Sbjct: 180 TGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCA-GYSYGKIDSCQ 238

Query: 187 GDSGGGL 167
           GDSGG L
Sbjct: 239 GDSGGPL 245


>Z99942-6|CAI79199.1|  119|Caenorhabditis elegans Hypothetical
           protein H13N06.7 protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 551 CFRDDRLFKPPTLRRIDTADCTTSRHRPHQVWTL 450
           CF+  RL    + R  DT++C    + P + WTL
Sbjct: 52  CFKSSRLENVKSCREADTSNCAAPEY-PTRKWTL 84


>Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical
           protein F54B8.8 protein.
          Length = 285

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 70  NETCRXNQCDNQYWKRRTK 126
           N  C  NQC N YWKR  +
Sbjct: 163 NFHCMINQCFNNYWKRHER 181


>Z35598-7|CAA84650.2|  325|Caenorhabditis elegans Hypothetical
           protein F10F2.3 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 403 YHKDYNYDGYRLTATGWGRTWTNGT 329
           Y  + NY    L AT WG TW +G+
Sbjct: 97  YFLEQNYTEAELYATTWGDTWGSGS 121


>AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical
           protein H12I13.3 protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = -3

Query: 547 FETTDY-LNHPLYDESIQQIV 488
           F+ +DY  NHPLYDES ++++
Sbjct: 450 FDFSDYPKNHPLYDESNKKVI 470


>U41270-2|AAA82440.1|  298|Caenorhabditis elegans Cell-death-related
           nuclease protein4 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 547 FETT-DYLNHPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPI 419
           FETT D  N     E IQ  +  +D+   K    + FN YV+P+
Sbjct: 16  FETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPV 59


>AY303578-1|AAP57300.1|  298|Caenorhabditis elegans cell
           death-related nuclease 4 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 547 FETT-DYLNHPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPI 419
           FETT D  N     E IQ  +  +D+   K    + FN YV+P+
Sbjct: 16  FETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPV 59


>AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical
           protein Y102A5C.27 protein.
          Length = 262

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -3

Query: 496 QIVQPHDIGLIKFGRSLVFNDYVQPIRL-QSSYHKDYNY---DGYRLTAT 359
           Q VQ +++    FG    F++   P+   +S+YH D+NY   + YR+ ++
Sbjct: 9   QAVQANNLNTDHFGTCGTFDNSRAPVTSHRSTYHNDHNYHYNNNYRIQSS 58


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -3

Query: 379 GYRLTATGWG----RTWTNGTAPENMNWVFLRGVTNAFCSEIFVINNIVQDSTICASGYN 212
           G  +T+ GWG    + + N   P  +  + L   T A C E +   +I  DS  C +   
Sbjct: 209 GANVTSFGWGSDPGKGFDNAAFPM-IQVLTLATETLATCEENWG-TSIPFDS-FCTA--E 263

Query: 211 VTSQSTCQGDSGGGLT 164
              ++ C GDSGGGLT
Sbjct: 264 EEDKNVCSGDSGGGLT 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,326,666
Number of Sequences: 27780
Number of extensions: 285573
Number of successful extensions: 764
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)