Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m15r
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 38 0.008
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 33 0.21
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 33 0.28
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 33 0.28
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_23123| Best HMM Match : efhand (HMM E-Value=2.8e-07) 32 0.37
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_52292| Best HMM Match : WD40 (HMM E-Value=1.6e-09) 31 0.86
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_6316| Best HMM Match : tRNA_int_endo (HMM E-Value=0.016) 31 1.1
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 30 1.5
SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21) 30 1.5
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 29 2.6
SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1) 29 4.6
SB_34697| Best HMM Match : Ion_trans (HMM E-Value=7.9e-38) 29 4.6
SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_39863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 28 6.1
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 28 6.1
SB_27392| Best HMM Match : Kazal_1 (HMM E-Value=0.00072) 28 6.1
SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30) 28 6.1
SB_3385| Best HMM Match : 3_5_exonuc (HMM E-Value=0.0015) 28 6.1
SB_47669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 37.9 bits (84), Expect = 0.008
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Frame = -1
Query: 591 FDTDKSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHLTNIWNGLQKAADIDGDGKI 412
FD D SGTI + E + L + +P+ E ++ + + D DG+G++
Sbjct: 9 FDKDGSGTISNEELEVVMKSLGQ-------NPSDEELQQMIQEV--------DADGNGEV 53
Query: 411 TQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTVQQSFGIDKAQA 232
EE+L++ K Q + + F V D GDG+I E +V S G +K
Sbjct: 54 DFEEFLAMMKKQMQ----HRDAEAEMREAFRVFDRNGDGSISEWELRSVMASLG-EKLSD 108
Query: 231 VEAFKKMAQ----GKDVITWAEYQTLFKE 157
E + M + G VI + E+ + +E
Sbjct: 109 DEIKEMMREADLDGDGVINFQEFVQMVRE 137
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -1
Query: 435 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEY 274
D +GDG IT E L T E D+ + F DS G+GAID E+
Sbjct: 222 DDNGDGCITATELKKLVTSLGYNITEAELMDMMNQIAFLFVDSDGNGAIDFPEF 275
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = -1
Query: 435 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTV 265
D DGDG IT +E ++ Q T E QD + + D+ G+G ID E+ T+
Sbjct: 10 DKDGDGTITTKELGTVMRSLGQNPTEAELQD-----MINEVDADGNGTIDFPEFLTM 61
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = -1
Query: 435 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTV 265
D DGDG IT +E ++ Q T E QD + + D+ G+G ID E+ T+
Sbjct: 10 DKDGDGTITTKELGTVMRSLGQNPTEAELQD-----MINEVDADGNGTIDFPEFLTM 61
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = -1
Query: 435 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTV 265
D DGDG IT +E ++ Q T E QD + + D+ G+G ID E+ T+
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAELQD-----MINEVDADGNGTIDFPEFLTM 72
>SB_23123| Best HMM Match : efhand (HMM E-Value=2.8e-07)
Length = 50
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 333 KSLFHVQDSGGDGAIDAEEYSTVQQSFGI-DKAQAVEAFKKMA 208
K+ F D GDG IDAEE V +S G+ K + ++A K A
Sbjct: 3 KNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQA 45
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 333 KSLFHVQDSGGDGAIDAEEYSTVQQSFGI-DKAQAVEAFKKMA 208
K+ F D GDG IDAEE V +S G+ K + ++A K A
Sbjct: 18 KNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQA 60
>SB_52292| Best HMM Match : WD40 (HMM E-Value=1.6e-09)
Length = 743
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 525 KARGWAPGSPALEVAKEHLTNIWNGLQKAADIDGDGKITQEEWLS 391
K W SP ++ KE +W LQ + ++G+ +TQ EW S
Sbjct: 184 KVAMWKHASPKVKGRKEEGEEMWE-LQPPSILEGEADLTQIEWAS 227
>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3307
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 489 EVAKEHLTNIWNGLQKAADIDGDGKITQEEWLSL 388
EV K HL ++ L + D DGDGK+ +++ SL
Sbjct: 998 EVCKSHLNVEFDTLFQRLDFDGDGKVKEDDLRSL 1031
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 31.1 bits (67), Expect = 0.86
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = -1
Query: 441 AADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTVQ 262
A D +GDG I +E++++ +Y + ++ ++ + F V D GDG I AEE
Sbjct: 186 AFDKNGDGAIDFDEFVTM-SRYFRGRGAEKLEENL-RQAFRVFDRNGDGYISAEELRVAV 243
Query: 261 QSFG--IDKAQAVEAFKKMAQ-GKDVITWAEYQTLFKE 157
+ G + + +A E + Q G + + E+ + K+
Sbjct: 244 TTLGDALTQDEAEELIGMLDQDGDGKLGYEEFVVIAKK 281
>SB_6316| Best HMM Match : tRNA_int_endo (HMM E-Value=0.016)
Length = 280
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = -1
Query: 525 KARGWAPGSPALEVAK---EHLTNIW---NGLQKAADIDGDGKITQEEWLSLWDKYA 373
+++GW P + L+ EH T W NGL+ A D + EE LWD Y+
Sbjct: 154 RSKGWVPKT-GLKYGTDYGEHFTKAWVPKNGLEYATDYGTGVENWDEELSRLWDSYS 209
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = -1
Query: 579 KSGTIEKSDFEKSAEGLAKAR---GWAPGSPALEVAKEHLT----NIWNGLQKAADIDGD 421
K+ + F + +A+ G +E+ KEH++ +I K +++GD
Sbjct: 626 KANFMRSDQFHRQTAAFDRAQDLTGQKSADECMEILKEHISQRSPDIRKTFIKFNNVNGD 685
Query: 420 GKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFH 319
GK++++E+ + D T +++ + + FH
Sbjct: 686 GKLSRKEFREVLDSLGLYMTDDQYRILSARLGFH 719
>SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21)
Length = 172
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = -1
Query: 333 KSLFHVQDSGGDGAIDAEEY-STVQQSFGIDKAQAV-EAFKKM-AQGKDVITWAEYQTLF 163
K LF D G G++D EE+ V+ S ++ + + +AF KM G VIT A+ + ++
Sbjct: 77 KQLFAQFDKDGSGSLDFEEFLRAVRPSMSKNRVEIIMKAFHKMDTTGDGVITIADLKKVY 136
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 177 TPPMLSHLYLEPSF*TPQQPELYLCQKTVEQLSTLQRRSRHRHPSLGRGKG 329
+PP+ S Y F ++PE L + T+ +S +++ R L RG G
Sbjct: 581 SPPLRSRRYSASGFANSRRPEKSLKKSTISHVSDIKKGQRTLKSCLNRGCG 631
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 29.5 bits (63), Expect = 2.6
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 15/102 (14%)
Frame = -1
Query: 639 VSDFRKKKLLLVFQVFFDTDKSGTIEKSDFEK---SAEGLAKA--------RGWAPGSPA 493
+++ +K+++ F +F DTD SGTI+ + + S E + KA G
Sbjct: 23 LTEEQKQEIREAFDLF-DTDGSGTIDAKELKSEKDSKEEILKAFKLFDDDETGKISFKNL 81
Query: 492 LEVAKEHLTNIWN-GLQK---AADIDGDGKITQEEWLSLWDK 379
VAKE N+ + LQ+ AD DGDG+I + E+L + K
Sbjct: 82 KRVAKELGENLTDEELQEMIDEADRDGDGEINEAEFLRIMKK 123
>SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1)
Length = 890
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 354 EWQDVFCKSLFHVQDSGGDGAIDAEEYSTVQQSFGIDKAQAVEAFKK 214
EW D+F K HVQ S G + Y V F Q++E F+K
Sbjct: 204 EWDDIFLKVERHVQKSEGHTFCN---YRDVPLQFVFGAEQSMELFRK 247
>SB_34697| Best HMM Match : Ion_trans (HMM E-Value=7.9e-38)
Length = 1851
Score = 28.7 bits (61), Expect = 4.6
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Frame = +1
Query: 199 FTLSHLFKRLNSLS-FIYAKRLLNS*VLFSVDRAIATRVLDVEKALAKNILPFLRCRSLS 375
FTL +L + + S + + LLN L ++ T +LD ++ + +L LR +
Sbjct: 1644 FTLEYLIRFFTAPSKYGFLLGLLNIVDLVAILPFYVTLLLDSSQSNSVTVLRVLRV--VR 1701
Query: 376 VFVP*RQPFFLSYFSVSVYIS--CLLESIPNISEVLLCYF 489
VF + F LS +S S+ + C+LESI + ++LC F
Sbjct: 1702 VF----RMFKLSRYSRSLQVIGYCVLESIRELGLLVLCLF 1737
>SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 405 EEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQ 313
E WLS W K++ TS P++ +D + F+VQ
Sbjct: 108 ENWLSFWGKFSCTS-PRKVKDFYKTLRFNVQ 137
>SB_39863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2978
Score = 28.3 bits (60), Expect = 6.1
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Frame = -1
Query: 579 KSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHLTNIWNGLQKAADIDGDGKI-TQE 403
+ G + ++S+EG + + S LE A TN G K + D + T +
Sbjct: 739 RGGKMSFELLQRSSEGRQRTKVRELLSHMLEDAWRKATN---GKSKVIEYDFLHHLFTWK 795
Query: 402 EWLSLWDKYAQTSTPQEWQDVFCK-------SLFHVQDSGGDGAIDAEEYSTVQQ 259
W D Y ++ + W D C+ S+ VQ+ DG+I + VQQ
Sbjct: 796 SWEGFLDFYGAAASREMWSDEACRIMERAISSIGRVQECIFDGSITVKTLKLVQQ 850
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 393 SLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTVQQSFG 250
SL DK + + W + K + + GGDGAID S + Q FG
Sbjct: 31 SLVDKIPD-ALQRVWANNLEKEVSVLSVGGGDGAIDTPMLSAIAQRFG 77
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 165 IKSGTPPMLSHLYLEPSF*TPQQPELYLCQKTVEQLSTLQRRSRHR-HPSLGRGKGSCKK 341
++ P H+ P TP++P +Y V++LST + R S GK + +K
Sbjct: 468 VEKEVAPSTPHIVAVPPATTPKKPAIYKFHIRVDKLSTQSDQLREEFRDSYREGKSTPRK 527
Query: 342 HPAIP 356
P
Sbjct: 528 FSITP 532
>SB_27392| Best HMM Match : Kazal_1 (HMM E-Value=0.00072)
Length = 196
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -1
Query: 453 GLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQ 346
G + D++ + I ++EWL + +A++S EW+
Sbjct: 158 GFVMSCDVNKNSVIDKQEWLLCFPAFARSSETTEWR 193
>SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30)
Length = 233
Score = 28.3 bits (60), Expect = 6.1
Identities = 32/125 (25%), Positives = 54/125 (43%)
Frame = -1
Query: 621 KKLLLVFQVFFDTDKSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHLTNIWNGLQK 442
+ L LVF F DTDKSG+I+ + K+ L +++KE + G+
Sbjct: 90 RDLKLVFDTF-DTDKSGSIDGRELRKAMRTL-----------GFKISKEGIA----GMIA 133
Query: 441 AADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTVQ 262
D D G+I +E+L ++ S ++ D + F + D+ G I E V
Sbjct: 134 DLDADQSGRIEFDEFLDF--IISKQSDGRDVHDEIVQG-FKMFDTDQSGRITLENLKQVS 190
Query: 261 QSFGI 247
+ G+
Sbjct: 191 RMCGV 195
>SB_3385| Best HMM Match : 3_5_exonuc (HMM E-Value=0.0015)
Length = 437
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1
Query: 243 KAQAVEAFKKMAQGKDVITWAEYQTLFKEYFTSDDPNALGNCILG 109
KA+ V+AF K+ + KD++ +T+F E + PN + N + G
Sbjct: 67 KAEDVDAFAKLKENKDLVDCGNVETVF-EAEGASSPN-VNNVVSG 109
>SB_47669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 412 YFSVSVYISCLLESIPNISEVLLCYF 489
Y S ++YI L ESI + ++L+CY+
Sbjct: 663 YLSYNIYIIILYESIYSQYQLLICYY 688
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,963,156
Number of Sequences: 59808
Number of extensions: 332032
Number of successful extensions: 910
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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