Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m13f
         (604 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994091-1|AAX86004.1|   83|Anopheles gambiae hyp6.3 precursor p...    25   1.9  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    24   3.3  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   5.8  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   5.8  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   5.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   7.6  

>AY994091-1|AAX86004.1|   83|Anopheles gambiae hyp6.3 precursor
           protein.
          Length = 83

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 50  MKFALLFVLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFVVSRAATI 214
           MKFA  FVL A+ AV     A P+  ++A A S    ++  +++      +AA +
Sbjct: 1   MKFAFAFVLIALFAVFAVSQALPQ-PEQAAASSNDGASAITKIVLELTPEQAAAV 54


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
 Frame = -2

Query: 267 LTRLPAG----AVNLTLRTRQLIVAARLTTKLRKSLSLEVILPILKALALSVDLGSATSL 100
           +T +P G    A  LTL TR+ I       + R  +  +V++  +    +         L
Sbjct: 94  VTSIPRGEKLRAAELTL-TREGIAHRSSRAQARTPVLYQVMVYDIVRPGVKGKRAPTFLL 152

Query: 99  VDTATIAVNTNNRANF 52
           VDT T+A+N +  A+F
Sbjct: 153 VDTKTLAINESGTASF 168


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 61  SELHLAGNLYWYSESIVS 8
           +E HLA +++W+S+ I S
Sbjct: 54  AEEHLAASIFWWSKIIFS 71


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 61  SELHLAGNLYWYSESIVS 8
           +E HLA +++W+S+ I S
Sbjct: 126 AEEHLAASIFWWSKIIFS 143


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 381  KNALRGAFTN*RFTKVKPTPPPVRRT 304
            +NA R A T  R  +  P PPP  RT
Sbjct: 1062 RNAARRAATQQRQAERLPPPPPSPRT 1087


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 330  PTPPPVRRTLVNCVDPRTRTALTR 259
            P+PPP  RT     D R R A  R
Sbjct: 1069 PSPPPSPRTAARRADLRLRQARFR 1092


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,781
Number of Sequences: 2352
Number of extensions: 10078
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)