Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m11r
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542144-1|CAG46941.1| 82|Homo sapiens P8 protein. 58 4e-08
BT006896-1|AAP35542.1| 82|Homo sapiens p8 protein (candidate o... 58 4e-08
BC002434-1|AAH02434.1| 82|Homo sapiens nuclear protein 1 protein. 58 4e-08
AF135266-1|AAD49221.1| 82|Homo sapiens p8 protein homolog prot... 58 4e-08
AF069074-1|AAC19385.1| 82|Homo sapiens P8 protein protein. 58 4e-08
AF069073-1|AAC19384.1| 82|Homo sapiens P8 protein protein. 58 4e-08
AC002425-2|AAC05336.1| 82|Homo sapiens Gene product with simil... 58 4e-08
AC002425-1|AAC05335.1| 100|Homo sapiens Gene product with simil... 52 2e-06
BC130358-1|AAI30359.1| 395|Homo sapiens vomeronasal 1 receptor ... 33 0.92
BC130356-1|AAI30357.1| 395|Homo sapiens vomeronasal 1 receptor ... 33 0.92
AY312482-1|AAP85617.1| 395|Homo sapiens pheromone receptor prot... 33 0.92
AY312481-1|AAP85616.1| 395|Homo sapiens pheromone receptor prot... 33 0.92
AY312480-1|AAP85615.1| 395|Homo sapiens pheromone receptor prot... 33 0.92
AF370359-1|AAM83034.1| 395|Homo sapiens V1R-like receptor 2 pro... 33 0.92
AB083607-1|BAB89320.1| 395|Homo sapiens putative G-protein coup... 33 0.92
BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1... 31 3.7
BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1... 31 3.7
>CR542144-1|CAG46941.1| 82|Homo sapiens P8 protein.
Length = 82
Score = 57.6 bits (133), Expect = 4e-08
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 589 QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 413
Q P ++ DE D Y+ H + G GG++ RTK+EA+ +TN P GH RK+VTK
Sbjct: 13 QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69
Query: 412 LMNAEHNKK 386
L N+E K+
Sbjct: 70 LQNSERKKR 78
>BT006896-1|AAP35542.1| 82|Homo sapiens p8 protein (candidate of
metastasis 1) protein.
Length = 82
Score = 57.6 bits (133), Expect = 4e-08
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 589 QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 413
Q P ++ DE D Y+ H + G GG++ RTK+EA+ +TN P GH RK+VTK
Sbjct: 13 QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69
Query: 412 LMNAEHNKK 386
L N+E K+
Sbjct: 70 LQNSERKKR 78
>BC002434-1|AAH02434.1| 82|Homo sapiens nuclear protein 1 protein.
Length = 82
Score = 57.6 bits (133), Expect = 4e-08
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 589 QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 413
Q P ++ DE D Y+ H + G GG++ RTK+EA+ +TN P GH RK+VTK
Sbjct: 13 QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69
Query: 412 LMNAEHNKK 386
L N+E K+
Sbjct: 70 LQNSERKKR 78
>AF135266-1|AAD49221.1| 82|Homo sapiens p8 protein homolog
protein.
Length = 82
Score = 57.6 bits (133), Expect = 4e-08
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 589 QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 413
Q P ++ DE D Y+ H + G GG++ RTK+EA+ +TN P GH RK+VTK
Sbjct: 13 QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69
Query: 412 LMNAEHNKK 386
L N+E K+
Sbjct: 70 LQNSERKKR 78
>AF069074-1|AAC19385.1| 82|Homo sapiens P8 protein protein.
Length = 82
Score = 57.6 bits (133), Expect = 4e-08
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 589 QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 413
Q P ++ DE D Y+ H + G GG++ RTK+EA+ +TN P GH RK+VTK
Sbjct: 13 QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69
Query: 412 LMNAEHNKK 386
L N+E K+
Sbjct: 70 LQNSERKKR 78
>AF069073-1|AAC19384.1| 82|Homo sapiens P8 protein protein.
Length = 82
Score = 57.6 bits (133), Expect = 4e-08
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 589 QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 413
Q P ++ DE D Y+ H + G GG++ RTK+EA+ +TN P GH RK+VTK
Sbjct: 13 QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69
Query: 412 LMNAEHNKK 386
L N+E K+
Sbjct: 70 LQNSERKKR 78
>AC002425-2|AAC05336.1| 82|Homo sapiens Gene product with
similarity to Rat P8 protein.
Length = 82
Score = 57.6 bits (133), Expect = 4e-08
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 589 QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 413
Q P ++ DE D Y+ H + G GG++ RTK+EA+ +TN P GH RK+VTK
Sbjct: 13 QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69
Query: 412 LMNAEHNKK 386
L N+E K+
Sbjct: 70 LQNSERKKR 78
>AC002425-1|AAC05335.1| 100|Homo sapiens Gene product with
similarity to Rat P8 protein.
Length = 100
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -1
Query: 514 IFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 386
+ TG GG++ RTK+EA+ +TN P GH RK+VTKL N+E K+
Sbjct: 53 LVTGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKKR 96
>BC130358-1|AAI30359.1| 395|Homo sapiens vomeronasal 1 receptor 2
protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.92
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 357 QSI*CLVFEVFLLCSAFMSFVT-IFLECPDGSKWLVCSDASFLVRCLP 497
QSI LV F LC A +SF+T ++L D S W + + A+ ++ C P
Sbjct: 315 QSILALV-STFALCYA-LSFITYVYLALFDNSSWWLVNTAALIIACFP 360
>BC130356-1|AAI30357.1| 395|Homo sapiens vomeronasal 1 receptor 2
protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.92
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 357 QSI*CLVFEVFLLCSAFMSFVT-IFLECPDGSKWLVCSDASFLVRCLP 497
QSI LV F LC A +SF+T ++L D S W + + A+ ++ C P
Sbjct: 315 QSILALV-STFALCYA-LSFITYVYLALFDNSSWWLVNTAALIIACFP 360
>AY312482-1|AAP85617.1| 395|Homo sapiens pheromone receptor
protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.92
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 357 QSI*CLVFEVFLLCSAFMSFVT-IFLECPDGSKWLVCSDASFLVRCLP 497
QSI LV F LC A +SF+T ++L D S W + + A+ ++ C P
Sbjct: 315 QSILALV-STFALCYA-LSFITYVYLALFDNSSWWLVNTAALIIACFP 360
>AY312481-1|AAP85616.1| 395|Homo sapiens pheromone receptor
protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.92
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 357 QSI*CLVFEVFLLCSAFMSFVT-IFLECPDGSKWLVCSDASFLVRCLP 497
QSI LV F LC A +SF+T ++L D S W + + A+ ++ C P
Sbjct: 315 QSILALV-STFALCYA-LSFITYVYLALFDNSSWWLVNTAALIIACFP 360
>AY312480-1|AAP85615.1| 395|Homo sapiens pheromone receptor
protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.92
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 357 QSI*CLVFEVFLLCSAFMSFVT-IFLECPDGSKWLVCSDASFLVRCLP 497
QSI LV F LC A +SF+T ++L D S W + + A+ ++ C P
Sbjct: 315 QSILALV-STFALCYA-LSFITYVYLALFDNSSWWLVNTAALIIACFP 360
>AF370359-1|AAM83034.1| 395|Homo sapiens V1R-like receptor 2
protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.92
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 357 QSI*CLVFEVFLLCSAFMSFVT-IFLECPDGSKWLVCSDASFLVRCLP 497
QSI LV F LC A +SF+T ++L D S W + + A+ ++ C P
Sbjct: 315 QSILALV-STFALCYA-LSFITYVYLALFDNSSWWLVNTAALIIACFP 360
>AB083607-1|BAB89320.1| 395|Homo sapiens putative G-protein coupled
receptor protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.92
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 357 QSI*CLVFEVFLLCSAFMSFVT-IFLECPDGSKWLVCSDASFLVRCLP 497
QSI LV F LC A +SF+T ++L D S W + + A+ ++ C P
Sbjct: 315 QSILALV-STFALCYA-LSFITYVYLALFDNSSWWLVNTAALIIACFP 360
>BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1
protein.
Length = 709
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -1
Query: 544 DYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNA--EHNKKTSNTK 371
+ YN + ++ G K+++ + S T PS HSR++V+K +++ +NK+ +TK
Sbjct: 29 ELYNPESEQDKNEKKGSKRKSDRMESTDTKRQKPSVHSRQLVSKPLSSSVSNNKRIVSTK 88
>BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1
protein.
Length = 727
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -1
Query: 544 DYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNA--EHNKKTSNTK 371
+ YN + ++ G K+++ + S T PS HSR++V+K +++ +NK+ +TK
Sbjct: 29 ELYNPESEQDKNEKKGSKRKSDRMESTDTKRQKPSVHSRQLVSKPLSSSVSNNKRIVSTK 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,598,625
Number of Sequences: 237096
Number of extensions: 2009907
Number of successful extensions: 3643
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3643
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -