Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m11f
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22181-7|CAA80189.2|   62|Caenorhabditis elegans Hypothetical pr...    32   0.21 
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    30   1.1  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U88308-3|AAB42329.2|  430|Caenorhabditis elegans Resistance to i...    27   5.9  
U80847-7|AAO91744.1|  778|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U80847-6|AAK68190.1|  796|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U80847-5|AAK68189.1|  793|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U43375-7|AAA83624.1|  271|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z22181-7|CAA80189.2|   62|Caenorhabditis elegans Hypothetical
           protein ZK632.9 protein.
          Length = 62

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 172 GGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 285
           G  +RTK +  EH +   P G +RK+V    N E  +K
Sbjct: 23  GSGKRTKSDRVEHKHASQPGGDTRKVVQTASNGEAKRK 60


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +1

Query: 103 SEAFFD-EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 279
           S+ F D + D  +     H+ +   G+   KKE+ + T+  +PS       T+  N E +
Sbjct: 139 SDCFSDKDLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEED 198

Query: 280 KKTSNTKH*MD 312
            K    K  +D
Sbjct: 199 DKEKTDKEKLD 209


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +1

Query: 103 SEAFFD-EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 279
           S+ F D + D  +     H+ +   G+   KKE+ + T+  +PS       T+  N E +
Sbjct: 139 SDCFSDKDLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEED 198

Query: 280 KKTSNTKH*MD 312
            K    K  +D
Sbjct: 199 DKEKTDKEKLD 209


>U88308-3|AAB42329.2|  430|Caenorhabditis elegans Resistance to
           inhibitors of cholinesteraseprotein 19 protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +1

Query: 124 YDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAE 273
           Y+ Y+F+   H+ TG   ++  K E  E      P G+  ++   L   E
Sbjct: 265 YNNYDFEILSHLATGTKPERERKSEKEESAKTSQPRGNEEELKNLLFGRE 314


>U80847-7|AAO91744.1|  778|Caenorhabditis elegans Hypothetical
           protein C17H11.6c protein.
          Length = 778

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 460 KISTSPTHRGCDLERD 507
           K+S+S  HRGC +ERD
Sbjct: 594 KLSSSSIHRGCVIERD 609


>U80847-6|AAK68190.1|  796|Caenorhabditis elegans Hypothetical
           protein C17H11.6b protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 460 KISTSPTHRGCDLERD 507
           K+S+S  HRGC +ERD
Sbjct: 597 KLSSSSIHRGCVIERD 612


>U80847-5|AAK68189.1|  793|Caenorhabditis elegans Hypothetical
           protein C17H11.6a protein.
          Length = 793

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 460 KISTSPTHRGCDLERD 507
           K+S+S  HRGC +ERD
Sbjct: 594 KLSSSSIHRGCVIERD 609


>U43375-7|AAA83624.1|  271|Caenorhabditis elegans Hypothetical
           protein K09C4.4 protein.
          Length = 271

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -3

Query: 287 VFLLCSAFMSFVTIFLEC--PDGSKWLVCSD 201
           VF L +   SF+ +   C  P+  KWLVC +
Sbjct: 146 VFPLAALISSFLVLIWVCRLPESPKWLVCQN 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,571,268
Number of Sequences: 27780
Number of extensions: 227227
Number of successful extensions: 692
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)