Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m11f
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.45 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   3.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   4.2  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   5.6  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   5.6  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   5.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.3  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   9.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -2

Query: 255 RDDLSRMPGRIEVVGVFRRFF--LGALLT 175
           +D+L + P RI   G+FRRF+  LG L T
Sbjct: 538 KDELGK-PSRISKQGLFRRFYNLLGKLST 565


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/18 (38%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -1

Query: 376 RPPF-VWQLNSPSASHSC 326
           RP +  W+LN+ ++ H+C
Sbjct: 8   RPSYCTWELNATNSPHTC 25


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = -3

Query: 410 IHPNTPRVSAIASSFR 363
           IHP  PR+ ++ ++++
Sbjct: 160 IHPGDPRIKSVVTAYK 175


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 106 EAFFDEYDYYNFD 144
           E + D+YDY N D
Sbjct: 21  ELYSDKYDYVNID 33


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 229 SGHSRKIVTKLMNAEHNKKTSNTKH*MDC 315
           +G S+KI+ ++ N   N +  N +  ++C
Sbjct: 37  TGTSQKIIDEVYNGNVNVEDENVQSYVEC 65


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 106 EAFFDEYDYYNFD 144
           E + D+YDY N D
Sbjct: 21  ELYSDKYDYVNID 33


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 345 GLLSCQTKGGRYCGY 389
           GL SC T  GR  GY
Sbjct: 143 GLKSCHTGVGRNVGY 157


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 345 GLLSCQTKGGRYCGY 389
           GL SC T  GR  GY
Sbjct: 143 GLKSCHTGVGRNVGY 157


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 345 GLLSCQTKGGRYCGY 389
           GL SC T  GR  GY
Sbjct: 143 GLKSCHTGVGRNVGY 157


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 300 TLDGLLINRQLWLAEGLLSCQTKGGRYCG 386
           ++D   I+ + +LAE   S      +YCG
Sbjct: 60  SIDRSSIHEESYLAESSRSIDPCASKYCG 88


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 224 SKWLVCSDASFLVRCL 177
           SKWL  + ++  +RCL
Sbjct: 71  SKWLSINHSACAIRCL 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,830
Number of Sequences: 438
Number of extensions: 2977
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)