Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m09r
(738 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35630.1 68417.m05060 phosphoserine aminotransferase, chlorop... 236 1e-62
At2g17630.1 68415.m02039 phosphoserine aminotransferase, putativ... 228 3e-60
At2g41310.1 68415.m05101 two-component responsive regulator / re... 34 0.11
At5g58150.1 68418.m07278 leucine-rich repeat transmembrane prote... 29 3.2
At2g38365.1 68415.m04713 expressed protein 29 3.2
At1g50370.1 68414.m05646 serine/threonine protein phosphatase, p... 29 3.2
At5g37210.1 68418.m04468 DC1 domain-containing protein contains ... 29 4.3
At5g49660.1 68418.m06147 leucine-rich repeat transmembrane prote... 28 5.6
At3g57040.1 68416.m06349 two-component responsive regulator / re... 28 5.6
At2g42500.2 68415.m05259 serine/threonine protein phosphatase PP... 28 7.4
At2g42500.1 68415.m05258 serine/threonine protein phosphatase PP... 28 7.4
At1g51910.1 68414.m05851 protein kinase family protein contains ... 28 7.4
At5g55830.1 68418.m06957 lectin protein kinase, putative similar... 27 9.8
At4g33080.1 68417.m05678 protein kinase, putative contains prote... 27 9.8
At3g05580.1 68416.m00619 serine/threonine protein phosphatase, p... 27 9.8
At2g25470.1 68415.m03050 leucine-rich repeat family protein cont... 27 9.8
At2g01050.1 68415.m00010 hypothetical protein 27 9.8
>At4g35630.1 68417.m05060 phosphoserine aminotransferase,
chloroplast (PSAT) identical to Phosphoserine
aminotransferase, chloroplast precursor (PSAT)
(SP:Q96255)[Arabidopsis thaliana]; contains TIGRFAM
TIGR01364: phosphoserine aminotransferase; contains Pfam
PF00266: aminotransferase, class V
Length = 430
Score = 236 bits (578), Expect = 1e-62
Identities = 117/224 (52%), Positives = 153/224 (68%)
Frame = -3
Query: 736 NASYVHICTNEPIHGVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNIGT 557
+A Y+HIC NE IHGVEF P K L+ADMSSN SK VDVSKFGVIY GAQKN+G
Sbjct: 210 DAKYLHICANETIHGVEFKDYPVPKNGFLVADMSSNFCSKPVDVSKFGVIYGGAQKNVGP 269
Query: 556 SGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGL 377
SGV +VI+R+DL+ A P +LD+ + + +S+ NTPP F IY+ G V + + GGL
Sbjct: 270 SGVTIVIIRKDLIGNAQDITPVMLDYKIHDENSSLYNTPPCFGIYMCGLVFEDLLEQGGL 329
Query: 376 EGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIGCPGDDALEKEFLKGAE 197
+ + + +KA L+YN IE+SNGF+ PV K+VRS MNVPF + LE EF+K A
Sbjct: 330 KEVEKKNQRKADLLYNAIEESNGFFRCPVEKSVRSLMNVPFTL---EKSELEAEFIKEAA 386
Query: 196 TLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKHS 65
++QLKGHR VGG+RASIYNA+ L V+ LV +M++F KH+
Sbjct: 387 KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430
>At2g17630.1 68415.m02039 phosphoserine aminotransferase, putative
similar to Phosphoserine aminotransferase, chloroplast
precursor (PSAT) (SP:Q96255) [Arabidopsis thaliana];
contains TIGRFAM TIGR01364: phosphoserine
aminotransferase; contains Pfam PF00266:
aminotransferase, class V
Length = 422
Score = 228 bits (558), Expect = 3e-60
Identities = 117/227 (51%), Positives = 154/227 (67%), Gaps = 3/227 (1%)
Frame = -3
Query: 736 NASYVHICTNEPIHGVEFDFIP---DTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQKN 566
+A Y+HIC NE IHGVEF P + GV LIADMSSN SK VDVSKFGVIYAGAQKN
Sbjct: 200 DAKYLHICANETIHGVEFKDYPLVENPDGV-LIADMSSNFCSKPVDVSKFGVIYAGAQKN 258
Query: 565 IGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRN 386
+G SGV +VI+R+DL+ A P +LD+ + + +S+ NTPP F IY+ G V +
Sbjct: 259 VGPSGVTIVIIRKDLIGNARDITPVMLDYKIHDENSSLYNTPPCFGIYMCGLVFDDLLEQ 318
Query: 385 GGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIGCPGDDALEKEFLK 206
GGL+ + + +KA L+YN I++S GF+ PV K+VRS MNVPF + LE EF+K
Sbjct: 319 GGLKEVEKKNQRKAELLYNAIDESRGFFRCPVEKSVRSLMNVPFTL---EKSELEAEFIK 375
Query: 205 GAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKHS 65
A ++QLKGHR VGG+RASIYNA+ L V+ LV +M++F +H+
Sbjct: 376 EAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA 422
>At2g41310.1 68415.m05101 two-component responsive regulator /
response reactor 3 (RR3) identical to response reactor 3
GI:3273200 from [Arabidopsis thaliana]; contains Pfam
profile: PF00072 response regulator receiver domain
Length = 225
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = -3
Query: 325 IEQSNGFYYAPVAKNVRSKMNVPFRIGCPGDDALEKEFLKGAETLGLIQLKGHRDVGGIR 146
+++S F PV + S NVP RI ++ E+ FLK + L +LK H ++
Sbjct: 93 VKESAAFRSIPVV--IMSSENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLK 150
Query: 145 ASIYNAVTLEEVQALVQYMEEFYKKHSK*ILLNLYKQ 35
V +EE+ +EE ++ S +L L+++
Sbjct: 151 KESEKPVAIEEIVVSKPEIEEEEEESSVIEILPLHQE 187
>At5g58150.1 68418.m07278 leucine-rich repeat transmembrane protein
kinase, putative
Length = 785
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 398 DSKEWRIRRNVSIGNKESLTYLQH 327
DS WR+R +++G +L +L H
Sbjct: 612 DSAPWRLRHKIALGTARALAFLHH 635
>At2g38365.1 68415.m04713 expressed protein
Length = 120
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 373 GMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNV 260
G+SQL TKK ++I+NT E +N P + + ++ +
Sbjct: 70 GISQLVTKKWTIIFNT-ENTNNHVSLPAPQEISPRLRL 106
>At1g50370.1 68414.m05646 serine/threonine protein phosphatase,
putative nearly identical to serine/threonine protein
phosphatase [Arabidopsis thaliana] GI:14582206
Length = 303
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 193 KSQHPSRILFLRHHHQGNQF*MAHSFYCE 279
K++HP+ I LR +H+ Q + FY E
Sbjct: 97 KARHPANITLLRGNHESRQLTQVYGFYDE 125
>At5g37210.1 68418.m04468 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 625
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 166 CVLLAE*VPKSQHPSRILFLRHHHQGNQF 252
C+ L + S+HP RI F HQGN F
Sbjct: 276 CIDLPRVIRISRHPHRISFTPSFHQGNWF 304
>At5g49660.1 68418.m06147 leucine-rich repeat transmembrane protein
kinase, putative contains leucine rich repeat (LRR)
domains, Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 966
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 389 EWRIRRNVSIGNKESLTYLQHN 324
EWR R +++G + L YL H+
Sbjct: 758 EWRTRHQIAVGVAQGLAYLHHD 779
>At3g57040.1 68416.m06349 two-component responsive regulator /
response reactor 4 (RR4) identical to responce reactor4
GI:3273202 from [Arabidopsis thaliana]; contains Pfam
profile: PF00072 response regulator receiver domain
Length = 234
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 325 IEQSNGFYYAPVAKNVRSKMNVPFRIGCPGDDALEKEFLKGAETLGLIQLKGH 167
+++S+ F PV + S NVP RI ++ E+ FLK L +LK H
Sbjct: 95 VKESSAFRDIPVV--IMSSENVPARISRCLEEGAEEFFLKPVRLADLNKLKPH 145
>At2g42500.2 68415.m05259 serine/threonine protein phosphatase
PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100
Serine/threonine protein phosphatase PP2A-3 catalytic
subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains
Pfam profile PF00149: Ser/Thr protein phosphatase
Length = 266
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 133 YILRHEYRQRLCVLLAE*VPKSQHPSRILFLRHHHQGNQF*MAHSFYCE 279
Y+ R Y LL K ++P RI LR +H+ Q + FY E
Sbjct: 43 YVDRGYYSVETVTLLV--ALKMRYPQRITILRGNHESRQITQVYGFYDE 89
>At2g42500.1 68415.m05258 serine/threonine protein phosphatase
PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100
Serine/threonine protein phosphatase PP2A-3 catalytic
subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains
Pfam profile PF00149: Ser/Thr protein phosphatase
Length = 313
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 133 YILRHEYRQRLCVLLAE*VPKSQHPSRILFLRHHHQGNQF*MAHSFYCE 279
Y+ R Y LL K ++P RI LR +H+ Q + FY E
Sbjct: 90 YVDRGYYSVETVTLLV--ALKMRYPQRITILRGNHESRQITQVYGFYDE 136
>At1g51910.1 68414.m05851 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 876
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 661 GVPLIADMSSNIMSKKVDVSKFGVI 587
G P D +N++S+K DV FGV+
Sbjct: 737 GTPGYLDPETNLLSEKTDVYSFGVV 761
>At5g55830.1 68418.m06957 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 681
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 425 LYNGSSITMDSKEWRIRRNVSIGNKESLTYLQH 327
LY S + +W R N++IG +L+YL H
Sbjct: 451 LYQESQTGAVALDWSHRLNIAIGLASALSYLHH 483
>At4g33080.1 68417.m05678 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 519
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -3
Query: 133 NAVTLEEVQALVQYMEEFYKKHSK*ILLNLYKQYIL 26
+++T+E+V A QY+E YK +K I +++IL
Sbjct: 18 SSLTMEKVAAAKQYIENHYKAQNKNIQERKERRWIL 53
>At3g05580.1 68416.m00619 serine/threonine protein phosphatase,
putative similar to serine/threonine protein phosphatase
PP1 isozyme 8 SP:O82734 from [Arabidopsis thaliana]
Length = 318
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 157 QRLCVLLAE*VPKSQHPSRILFLRHHHQGNQF*MAHSFYCE 279
+ +C+LLA K ++PS+I LR +H+ + + FY E
Sbjct: 104 ETICLLLAY---KIRYPSKIFLLRGNHEDAKINRIYGFYDE 141
>At2g25470.1 68415.m03050 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 910
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 556 SGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMF 431
S V L+ + ++ LN +P+C S L + + LN PP F
Sbjct: 626 SNVRLLDLSDNKLNGVIPSCLSNLSFGRLQEDAMALNIPPSF 667
>At2g01050.1 68415.m00010 hypothetical protein
Length = 515
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -3
Query: 721 HICTNEPIHGVEFDFIPDTKGVPLIADMSSN---IMSKKVDVSKFGVIYAGA 575
H N+P G+ F D VP+ D+ SN + ++ DV + G +Y+ A
Sbjct: 415 HGAANKPARGLIFGPTKDANSVPVGEDLLSNGKRLRVEQRDVGRPGGVYSSA 466
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,328,703
Number of Sequences: 28952
Number of extensions: 354074
Number of successful extensions: 933
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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