SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m09f
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   2.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.5  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   6.1  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   6.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   6.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.0  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -1

Query: 149 SSAKIKHFRHFHLFIYLINSYTTLFYQTT 63
           +SA +  F  +H+F++++ +    FY++T
Sbjct: 49  ASAVLLPFAIYHIFMHIVPTKLISFYKST 77


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/46 (19%), Positives = 23/46 (50%)
 Frame = +3

Query: 162 PEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNL 299
           P   + + +++ +  +N G+  +E   RS  +       +D+V++L
Sbjct: 132 PAMPHNLTRHDGSVIKNQGMPTMEAIARSGIWENCRAAYEDIVKHL 177


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 526 TLIPMLHMYIFVLMKQYMVL 585
           T IPML+ Y+F ++   +V+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV 103


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 526 TLIPMLHMYIFVLMKQYMVL 585
           T IPML+ Y+F ++   +V+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV 103


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 526 TLIPMLHMYIFVLMKQYMVL 585
           T IPML+ Y+F ++   +V+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV 103


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
          peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 82 HYFTKRHYRSQTCRG 38
          H+FTKR +    C+G
Sbjct: 41 HHFTKRSFFDIQCKG 55


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
          peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 82 HYFTKRHYRSQTCRG 38
          H+FTKR +    C+G
Sbjct: 41 HHFTKRSFFDIQCKG 55


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
          peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 82 HYFTKRHYRSQTCRG 38
          H+FTKR +    C+G
Sbjct: 41 HHFTKRSFFDIQCKG 55


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 471 LVLPPTDKYEDIPDQTKWNLDPN 539
           +V P  +K+ED+P      L  N
Sbjct: 283 IVEPKLNKHEDLPQDLSMKLSKN 305


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 471 LVLPPTDKYEDIPDQTKWNLDPN 539
           +V P  +K+ED+P      L  N
Sbjct: 175 IVEPKLNKHEDLPQDLSMKLSKN 197


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +3

Query: 255 YMKLNVE-IQDVVRNLLDV 308
           YM  ++  IQ VVRNLLD+
Sbjct: 56  YMNAHLSGIQLVVRNLLDI 74


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 159 LPEEVYEIIKNEL 197
           LP   Y+IIKN+L
Sbjct: 297 LPTHPYQIIKNQL 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,931
Number of Sequences: 336
Number of extensions: 2953
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -