Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m09f
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062790-1|AAY56663.1|  364|Drosophila melanogaster unknown prot...   173   2e-43
AY119560-1|AAM50214.1|  364|Drosophila melanogaster GM02605p pro...   173   2e-43
AE014297-4350|AAF56874.1|  364|Drosophila melanogaster CG11899-P...   173   2e-43

>DQ062790-1|AAY56663.1|  364|Drosophila melanogaster unknown
           protein.
          Length = 364

 Score =  173 bits (421), Expect = 2e-43
 Identities = 82/158 (51%), Positives = 99/158 (62%)
 Frame = +3

Query: 129 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDV 308
           V NF AGPAKLPEEV + ++  L N   SGIS++E SHRSS Y K++      +R LL+V
Sbjct: 2   VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNV 61

Query: 309 PDNYKVXXXXXXXXXXXXXVPLNLISRTGTADYVVTGAWSXXXXXXXXXYGKVNLVLPPT 488
           P NYK+             V LNLI +TGTADYV+TG+WS         YG VN VLP  
Sbjct: 62  PSNYKILLMQGGGTGQFAAVALNLIGKTGTADYVITGSWSAKAAKEAAQYGTVNAVLPKL 121

Query: 489 DKYEDIPDQTKWNLDPNASYVHICTNETIHGVEFDFIP 602
            KY  +P Q  W LDPNASYV+ C NET+ GVEFDF+P
Sbjct: 122 AKYTTVPRQETWKLDPNASYVYYCDNETVEGVEFDFVP 159


>AY119560-1|AAM50214.1|  364|Drosophila melanogaster GM02605p
           protein.
          Length = 364

 Score =  173 bits (421), Expect = 2e-43
 Identities = 82/158 (51%), Positives = 99/158 (62%)
 Frame = +3

Query: 129 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDV 308
           V NF AGPAKLPEEV + ++  L N   SGIS++E SHRSS Y K++      +R LL+V
Sbjct: 2   VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNV 61

Query: 309 PDNYKVXXXXXXXXXXXXXVPLNLISRTGTADYVVTGAWSXXXXXXXXXYGKVNLVLPPT 488
           P NYK+             V LNLI +TGTADYV+TG+WS         YG VN VLP  
Sbjct: 62  PSNYKILLMQGGGTGQFAAVALNLIGKTGTADYVITGSWSAKAAKEAAQYGTVNAVLPKL 121

Query: 489 DKYEDIPDQTKWNLDPNASYVHICTNETIHGVEFDFIP 602
            KY  +P Q  W LDPNASYV+ C NET+ GVEFDF+P
Sbjct: 122 AKYTTVPRQETWKLDPNASYVYYCDNETVEGVEFDFVP 159


>AE014297-4350|AAF56874.1|  364|Drosophila melanogaster CG11899-PA
           protein.
          Length = 364

 Score =  173 bits (421), Expect = 2e-43
 Identities = 82/158 (51%), Positives = 99/158 (62%)
 Frame = +3

Query: 129 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDV 308
           V NF AGPAKLPEEV + ++  L N   SGIS++E SHRSS Y K++      +R LL+V
Sbjct: 2   VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNV 61

Query: 309 PDNYKVXXXXXXXXXXXXXVPLNLISRTGTADYVVTGAWSXXXXXXXXXYGKVNLVLPPT 488
           P NYK+             V LNLI +TGTADYV+TG+WS         YG VN VLP  
Sbjct: 62  PSNYKILLMQGGGTGQFAAVALNLIGKTGTADYVITGSWSAKAAKEAAQYGTVNAVLPKL 121

Query: 489 DKYEDIPDQTKWNLDPNASYVHICTNETIHGVEFDFIP 602
            KY  +P Q  W LDPNASYV+ C NET+ GVEFDF+P
Sbjct: 122 AKYTTVPRQETWKLDPNASYVYYCDNETVEGVEFDFVP 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,838,890
Number of Sequences: 53049
Number of extensions: 470457
Number of successful extensions: 972
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)