Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m07f
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094631-1|AAM10984.1|  702|Drosophila melanogaster AT03259p pro...    46   3e-05
AE014297-2328|AAG22155.2|  702|Drosophila melanogaster CG11896-P...    46   3e-05

>AY094631-1|AAM10984.1|  702|Drosophila melanogaster AT03259p
           protein.
          Length = 702

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 20/47 (42%), Positives = 32/47 (68%)
 Frame = +2

Query: 365 NELMQECKYSAPGARLSARLRTALERMKPEQRRAVCDRKRDGCAPLF 505
           ++L++ECK S   + LS  LR  LE++  + RR +  ++R+GCAPLF
Sbjct: 61  HDLIEECKRSQEDSLLSRHLRHELEKLPRDSRRELVRKQRNGCAPLF 107


>AE014297-2328|AAG22155.2|  702|Drosophila melanogaster CG11896-PA
           protein.
          Length = 702

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 20/47 (42%), Positives = 32/47 (68%)
 Frame = +2

Query: 365 NELMQECKYSAPGARLSARLRTALERMKPEQRRAVCDRKRDGCAPLF 505
           ++L++ECK S   + LS  LR  LE++  + RR +  ++R+GCAPLF
Sbjct: 61  HDLIEECKRSQEDSLLSRHLRHELEKLPRDSRRELVRKQRNGCAPLF 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,227,174
Number of Sequences: 53049
Number of extensions: 296723
Number of successful extensions: 496
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)