Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m06r
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499B66 Cluster: hypothetical protein 25.t00011; ...    36   1.3  
UniRef50_A3ERZ4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_A4J2K4 Cluster: Alanyl-tRNA synthetase; n=7; Firmicutes...    33   7.2  
UniRef50_P57345 Cluster: GTP-binding protein era homolog; n=2; B...    33   7.2  
UniRef50_Q23863 Cluster: Histidine kinase A; n=2; Dictyostelium ...    33   9.5  

>UniRef50_UPI0000499B66 Cluster: hypothetical protein 25.t00011;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 25.t00011 - Entamoeba histolytica HM-1:IMSS
          Length = 207

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 549 IMHLTVLTDVFVASEVCFNFSISFFPCFIMKQYTSYTNFL 430
           I+H  ++ D+F  S  C  F +   P FI+  Y+SY   +
Sbjct: 96  ILHSVIINDIFALSMCCIGFGVYVAPLFIIGIYSSYNEMI 135


>UniRef50_A3ERZ4 Cluster: Putative uncharacterized protein; n=1;
           Leptospirillum sp. Group II UBA|Rep: Putative
           uncharacterized protein - Leptospirillum sp. Group II
           UBA
          Length = 499

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = -1

Query: 630 PVTFFFPDLFLPGVRNTASKPEPLASLIMHLTVLTDVFVASEVCFNFSISFF-PCFIMKQ 454
           P T+ F  +F PG R T+S    +A     L   +    +  VC    +S   PC + K 
Sbjct: 203 PCTYPFRVVFAPGARGTSSDVVYVACTSPELLGSSPPAASIFVCSIEELSSTTPCSVYKS 262

Query: 453 YTSYTNFLP 427
           YTSY + LP
Sbjct: 263 YTSYNSSLP 271


>UniRef50_A4J2K4 Cluster: Alanyl-tRNA synthetase; n=7;
           Firmicutes|Rep: Alanyl-tRNA synthetase -
           Desulfotomaculum reducens MI-1
          Length = 878

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +2

Query: 437 FVYDVYCFIIKQGKNDMEKLKQTSEATKTSVST--VRCIINEAKGSGLLAVLRTPGKKRS 610
           F+Y V   +IKQ ++   +LKQ +E     + T   R +   A GS +L+ L     K S
Sbjct: 320 FLYKVAQAVIKQMQDAYPELKQKAEHVLRVIRTEEERFLETLAAGSDILSALINEA-KAS 378

Query: 611 GKKKVTGMDSF 643
           G  ++TG D+F
Sbjct: 379 GASEITGDDAF 389


>UniRef50_P57345 Cluster: GTP-binding protein era homolog; n=2;
           Buchnera aphidicola|Rep: GTP-binding protein era homolog
           - Buchnera aphidicola subsp. Acyrthosiphon pisum
           (Acyrthosiphon pisumsymbiotic bacterium)
          Length = 283

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = +3

Query: 159 EIVSSALLVDQSNLASRTAPSFRLLPKVRLRTVESLSLL--IVKLFVIIACGLCCHCYLL 332
           +I +  +L+   N   +      +LP +  + + +L LL  I+K ++   C +   CY+ 
Sbjct: 128 KISNKIILLPFINFLKKKIDFIEILP-ISAKKISNLILLKNIIKSYLPENCHIYPECYIT 186

Query: 333 SVC*FFIKHTLCRDKLV*YLSTNFLPFLIKERVEN 437
           +   FF    + R++L+ +L    LP +IK  +E+
Sbjct: 187 TNSDFFTVSEIIREQLILFLGDE-LPSIIKVEIES 220


>UniRef50_Q23863 Cluster: Histidine kinase A; n=2; Dictyostelium
           discoideum|Rep: Histidine kinase A - Dictyostelium
           discoideum (Slime mold)
          Length = 2150

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 20/46 (43%), Positives = 26/46 (56%)
 Frame = -3

Query: 289 NNLTINNDRLSTVRKRTFGSKRNEGAVRDARFD*STNNALDTISPA 152
           NN  INN+ LST RKRT G+     +++D     S N   D+IS A
Sbjct: 593 NNNNINNNVLSTPRKRTKGNHSKTNSLQDFETS-SMNGGDDSISGA 637


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,306,607
Number of Sequences: 1657284
Number of extensions: 14018332
Number of successful extensions: 36785
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36777
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)