Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m06r
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   1.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +1

Query: 19  NSGLARHTFNCISICIVIGKLLEQMTLTAQNRILDHFGGEGEARRQGKSYRARYW-*ISR 195
           N+ L   + N   +C+ I + L    +   +++L HFG         + Y   YW  + R
Sbjct: 107 NNVLVHRSQNSNDVCLAIPESLVIKLVDYHHQLLGHFGATKVYNSMKREY---YWPNMYR 163

Query: 196 TLRPAPRPHSACSQ 237
           T++   R    C +
Sbjct: 164 TIKKRLRSCDLCQK 177


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 697 FAACYVVIMITSFYYTLN 644
           F   +VVI+IT F++T N
Sbjct: 531 FGVSFVVIVITIFFFTAN 548


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 697 FAACYVVIMITSFYYTLN 644
           F   +VVI+IT F++T N
Sbjct: 256 FGVSFVVIVITIFFFTAN 273


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 217  PHSACSQKYACV 252
            PH +CS  Y CV
Sbjct: 1214 PHESCSSFYVCV 1225


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 724 FRSLSTVRSFAACYVVIMITSFYYTLNETIHS 629
           F  ++ +R+    + + +IT FY     TIHS
Sbjct: 402 FSDITFMRTVWKFFNIFLITPFYNFNENTIHS 433


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 217 PHSACSQKYACVQWK 261
           PH  C + Y CV  K
Sbjct: 484 PHELCDKYYRCVHGK 498


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 533 YSLMFLLLPKSVLIFPYHS 477
           YS+   ++P  VLIF Y S
Sbjct: 207 YSISVFMVPLVVLIFTYTS 225


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 145 PHPHHQ 128
           PHPHHQ
Sbjct: 739 PHPHHQ 744


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 145 PHPHHQ 128
           PHPHHQ
Sbjct: 631 PHPHHQ 636


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 273 ITIDFPLYASVLLGASGMRARCGTQGSTDLPITRSI 166
           ++  FP+  SV +  SG+ A CG     +     SI
Sbjct: 160 VSFAFPINLSVPVLLSGLIAMCGMYYRDECSFAESI 195


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 273 ITIDFPLYASVLLGASGMRARCGTQGSTDLPITRSI 166
           ++  FP+  SV +  SG+ A CG     +     SI
Sbjct: 393 VSFAFPINLSVPVLLSGLIAMCGMYYRDECSFAESI 428


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 273 ITIDFPLYASVLLGASGMRARCGTQGSTDLPITRSI 166
           ++  FP+  SV +  SG+ A CG     +     SI
Sbjct: 393 VSFAFPINLSVPVLLSGLIAMCGMYYRDECSFAESI 428


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 261 SLSLLIVKLFVIIACGLCCH 320
           S +LLI++L  +  CG   H
Sbjct: 200 SFALLIMRLISVCLCGASVH 219


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 266 IVINR*VICYNCL-WTLLPLLFVECLLIFYKTY 361
           I  N  ++   CL +  L LLF+ C+  FY  +
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAF 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,692
Number of Sequences: 336
Number of extensions: 3827
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)