Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m06r
         (729 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL450426-2|CAH72410.1|  318|Homo sapiens olfactory receptor, fam...    30   7.4  
AK124779-1|BAC85944.1|  163|Homo sapiens protein ( Homo sapiens ...    30   7.4  
AB065714-1|BAC05935.1|  318|Homo sapiens seven transmembrane hel...    30   7.4  

>AL450426-2|CAH72410.1|  318|Homo sapiens olfactory receptor, family
           13, subfamily C, member 4 protein.
          Length = 318

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -1

Query: 645 TKLSIPVTFFFPDL-FLPGVRNTASKPEPLASLIMHLTVLTDVFVASEVCFNFSISFFPC 469
           ++L +P+ FF  +L FL     T+S P  L SLI     ++    A ++ F F++    C
Sbjct: 53  SRLHMPMYFFLGNLSFLDICYTTSSIPSTLVSLISKKRNISFSGCAVQMFFGFAMGSTEC 112

Query: 468 FIM 460
           F++
Sbjct: 113 FLL 115


>AK124779-1|BAC85944.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42789 fis, clone BRAWH3007221. ).
          Length = 163

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = -1

Query: 654 TH*TKLSIPVTFFFP----DLFLPGVRNTASKPEPLASLIMHLTVLTD-VFVASEVCFNF 490
           +H   LS+ + F F     D   P     AS   P  SL +    LT  +++A+  CF  
Sbjct: 44  SHPLSLSVSLLFLFSVSPSDHLTPLACCLASSLSPFLSLFVSSLFLTHFLYLAASPCFRL 103

Query: 489 SISFFP 472
           S+S FP
Sbjct: 104 SVSLFP 109


>AB065714-1|BAC05935.1|  318|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 318

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -1

Query: 645 TKLSIPVTFFFPDL-FLPGVRNTASKPEPLASLIMHLTVLTDVFVASEVCFNFSISFFPC 469
           ++L +P+ FF  +L FL     T+S P  L SLI     ++    A ++ F F++    C
Sbjct: 53  SRLHMPMYFFLGNLSFLDICYTTSSIPSTLVSLISKKRNISFSGCAVQMFFGFAMGSTEC 112

Query: 468 FIM 460
           F++
Sbjct: 113 FLL 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,870,411
Number of Sequences: 237096
Number of extensions: 2057165
Number of successful extensions: 4076
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4076
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)