Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m06f
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IH24 Cluster: Mediator of RNA polymerase II transcrip... 183 4e-45
UniRef50_Q6DH26 Cluster: Mediator of RNA polymerase II transcrip... 180 4e-44
UniRef50_Q9Y3C7 Cluster: Mediator of RNA polymerase II transcrip... 177 2e-43
UniRef50_UPI0000585F3C Cluster: PREDICTED: similar to CGI-125 pr... 171 2e-41
UniRef50_P91869 Cluster: Mediator of RNA polymerase II transcrip... 142 5e-33
UniRef50_Q8MPD6 Cluster: Mediator of RNA polymerase II transcrip... 131 2e-29
UniRef50_Q54NI7 Cluster: Putative uncharacterized protein; n=1; ... 124 2e-27
UniRef50_Q8VYB1 Cluster: Mediator of RNA polymerase II transcrip... 116 7e-25
UniRef50_Q6CAU9 Cluster: Mediator of RNA polymerase II transcrip... 111 2e-23
UniRef50_Q9USH1 Cluster: Mediator of RNA polymerase II transcrip... 106 5e-22
UniRef50_Q5K785 Cluster: Mediator of RNA polymerase II transcrip... 105 9e-22
UniRef50_Q5CUD3 Cluster: SOH1 family protein; n=2; Cryptosporidi... 104 2e-21
UniRef50_A7AMM2 Cluster: SOH1 family protein; n=1; Babesia bovis... 104 2e-21
UniRef50_UPI000049A1C3 Cluster: SOH1 protein; n=1; Entamoeba his... 102 6e-21
UniRef50_Q59P87 Cluster: Mediator of RNA polymerase II transcrip... 102 9e-21
UniRef50_Q6BUN9 Cluster: Mediator of RNA polymerase II transcrip... 101 2e-20
UniRef50_A2EJQ8 Cluster: SOH1 family protein; n=1; Trichomonas v... 99 5e-20
UniRef50_A0EB68 Cluster: Chromosome undetermined scaffold_87, wh... 93 5e-18
UniRef50_Q00RX9 Cluster: SOH1-like protein; n=3; Ostreococcus|Re... 87 3e-16
UniRef50_Q8SU76 Cluster: Mediator of RNA polymerase II transcrip... 87 5e-16
UniRef50_Q4P308 Cluster: Mediator of RNA polymerase II transcrip... 85 1e-15
UniRef50_Q7RRL4 Cluster: Putative uncharacterized protein PY0070... 83 4e-15
UniRef50_Q7SF81 Cluster: Mediator of RNA polymerase II transcrip... 83 4e-15
UniRef50_Q22Y25 Cluster: Putative uncharacterized protein; n=1; ... 79 9e-14
UniRef50_A6SAU9 Cluster: Putative uncharacterized protein; n=2; ... 77 4e-13
UniRef50_Q7R0S3 Cluster: GLP_186_71912_71520; n=1; Giardia lambl... 74 3e-12
UniRef50_P38633 Cluster: Mediator of RNA polymerase II transcrip... 73 8e-12
UniRef50_Q4UBF0 Cluster: Putative uncharacterized protein; n=3; ... 65 2e-09
UniRef50_A7TR40 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q0CQK7 Cluster: Mediator of RNA polymerase II transcrip... 56 6e-07
UniRef50_UPI00005A0ADA Cluster: PREDICTED: similar to Mediator o... 51 3e-05
UniRef50_A6RGM4 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_A7S237 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.5
UniRef50_A7QMC6 Cluster: Chromosome undetermined scaffold_125, w... 33 6.0
UniRef50_Q0IL16 Cluster: ORF103; n=4; Nucleopolyhedrovirus|Rep: ... 33 7.9
UniRef50_Q4Y5H1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_Q8IH24 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=7; Diptera|Rep: Mediator of
RNA polymerase II transcription subunit 31 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 183 bits (445), Expect = 4e-45
Identities = 75/114 (65%), Positives = 99/114 (86%)
Frame = +1
Query: 301 GKVMPETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEY 480
GK E+EE + R+Q+ELEFVQCL+NPNY++FLAQRG+ K+Q+F+NYLKYLQYW+EP+Y
Sbjct: 8 GKTAIESEELQKRRWQIELEFVQCLSNPNYLNFLAQRGFFKDQSFINYLKYLQYWKEPDY 67
Query: 481 ARYLKYPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRTRTLQ 642
A+YL YPMCL+FL+LLQ+E FRRE V++Q CKF+DDQAIL W HYTR+R + ++
Sbjct: 68 AKYLMYPMCLYFLDLLQYEHFRREIVNSQCCKFIDDQAILQWQHYTRKRIKLIE 121
>UniRef50_Q6DH26 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=12; Fungi/Metazoa group|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 136
Score = 180 bits (437), Expect = 4e-44
Identities = 83/116 (71%), Positives = 99/116 (85%)
Frame = +1
Query: 295 MAGKVMPETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREP 474
MAG VM ET+EQ R RFQ+ELEFVQCLANPNY++FLAQRGYL+E+ FVNYLKYL YW+EP
Sbjct: 1 MAG-VM-ETDEQARQRFQLELEFVQCLANPNYLNFLAQRGYLREKPFVNYLKYLLYWKEP 58
Query: 475 EYARYLKYPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRTRTLQ 642
EYA++LKYP CLH LELLQ+E FR+E V+AQ KF+D+Q IL W HY+R+RTR Q
Sbjct: 59 EYAKFLKYPHCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRTRLQQ 114
>UniRef50_Q9Y3C7 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=19; Coelomata|Rep: Mediator
of RNA polymerase II transcription subunit 31 - Homo
sapiens (Human)
Length = 131
Score = 177 bits (431), Expect = 2e-43
Identities = 78/117 (66%), Positives = 96/117 (82%), Gaps = 1/117 (0%)
Frame = +1
Query: 295 MAGKVMPETEEQ-NRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWRE 471
MA V ET++ NR+RFQ+ELEFVQCLANPNY++FLAQRGY K++ FVNYLKYL YW++
Sbjct: 1 MAAAVAMETDDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKD 60
Query: 472 PEYARYLKYPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRTRTLQ 642
PEYA+YLKYP CLH LELLQ+E FR+E V+AQ KF+D+Q IL W HY+R+R R Q
Sbjct: 61 PEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMRLQQ 117
>UniRef50_UPI0000585F3C Cluster: PREDICTED: similar to CGI-125
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to CGI-125 protein -
Strongylocentrotus purpuratus
Length = 223
Score = 171 bits (415), Expect = 2e-41
Identities = 73/111 (65%), Positives = 90/111 (81%)
Frame = +1
Query: 310 MPETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARY 489
M ++ +IRF+VELEFVQCLANP+Y++FLAQRGY K++ FVNYL YLQYW+EP YA+Y
Sbjct: 17 MEPPQDPEQIRFEVELEFVQCLANPHYLNFLAQRGYFKDKKFVNYLHYLQYWKEPNYAKY 76
Query: 490 LKYPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRTRTLQ 642
LK+P CLHFLELLQ+E FRRE +AQ KF++DQ +L W HYTRRR R Q
Sbjct: 77 LKFPQCLHFLELLQYEHFRRELANAQCVKFIEDQQLLHWQHYTRRRMRLQQ 127
>UniRef50_P91869 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=2; Caenorhabditis|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Caenorhabditis elegans
Length = 163
Score = 142 bits (345), Expect = 5e-33
Identities = 62/111 (55%), Positives = 77/111 (69%)
Frame = +1
Query: 316 ETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLK 495
E+ E + RF+VE EFVQ LANPNY++FLAQRGY KE+ FVNYLKYL YW++P+YAR LK
Sbjct: 2 ESVESEKTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKDPQYARCLK 61
Query: 496 YPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRTRTLQPP 648
+P CLH LE LQ + FR KF++DQ +L W Y R+R R P
Sbjct: 62 FPQCLHMLEALQSQQFRDSMAYGPSAKFVEDQVVLQWQFYLRKRHRLCMMP 112
>UniRef50_Q8MPD6 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=2; Platyhelminthes|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Taenia solium (Pork tapeworm)
Length = 148
Score = 131 bits (316), Expect = 2e-29
Identities = 56/107 (52%), Positives = 74/107 (69%)
Frame = +1
Query: 307 VMPETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYAR 486
V+ T E +RFQ+ELEFVQ L NP+Y+ FLAQ+G + F+NYL YLQYW+ P Y+R
Sbjct: 19 VVRNTLEDPWVRFQIELEFVQSLGNPDYLTFLAQQGCFDKPEFINYLSYLQYWKSPSYSR 78
Query: 487 YLKYPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRR 627
++ YP CLH L+LLQ FRRE V +F+DDQ +L W +Y R+R
Sbjct: 79 FITYPFCLHMLDLLQSPDFRREVAHESVTRFIDDQMLLHWKNYLRKR 125
>UniRef50_Q54NI7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 176
Score = 124 bits (299), Expect = 2e-27
Identities = 51/104 (49%), Positives = 74/104 (71%)
Frame = +1
Query: 316 ETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLK 495
+ EE N +RF +ELEF+QCL+NP Y+++LAQ Y +++ FVNYL YLQYW++PEYA+++
Sbjct: 47 DEEEANYLRFIMELEFIQCLSNPRYLNYLAQNRYFQDKAFVNYLVYLQYWKKPEYAKFIV 106
Query: 496 YPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRR 627
YP L+FL+LLQ E FR+E +Q F+ +Q W +Y R
Sbjct: 107 YPQSLYFLDLLQEERFRQELNHSQSTDFIHEQQFYHWQYYRNNR 150
>UniRef50_Q8VYB1 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=8; Magnoliophyta|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 196
Score = 116 bits (278), Expect = 7e-25
Identities = 49/104 (47%), Positives = 66/104 (63%)
Frame = +1
Query: 334 RIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCLH 513
R RF +ELEF+QCLANP YIH+LAQ Y +++ F+ YLKYLQYW+ PEY +++ YP CL+
Sbjct: 29 RQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLY 88
Query: 514 FLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRTRTLQP 645
FLELLQ+ FR + Q W +Y R + + P
Sbjct: 89 FLELLQNPNFRTAMAHPANKELAHRQQFYYWKNYRNNRLKHILP 132
>UniRef50_Q6CAU9 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=1; Yarrowia lipolytica|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Yarrowia lipolytica (Candida lipolytica)
Length = 160
Score = 111 bits (266), Expect = 2e-23
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +1
Query: 289 KMMAGKVMPETEEQNR-IRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYW 465
K + + +E+ +R +RF+ ELEFVQ LANP Y+ +LA YL+ F+NYL YL+YW
Sbjct: 9 KPVTDGIQDGSEQPDRSLRFEAELEFVQSLANPQYLSYLAHNKYLESPEFLNYLSYLEYW 68
Query: 466 REPEYARYLKYPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLW 606
REP+YAR+L YP CLH L+LLQ+ FR+E K + D+ W
Sbjct: 69 REPKYARFLVYPNCLHVLKLLQYATFRKEISRPDFAKQLMDEFYYAW 115
>UniRef50_Q9USH1 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=1; Schizosaccharomyces
pombe|Rep: Mediator of RNA polymerase II transcription
subunit 31 - Schizosaccharomyces pombe (Fission yeast)
Length = 139
Score = 106 bits (254), Expect = 5e-22
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = +1
Query: 331 NRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCL 510
++ RF++ELEFVQ L+NP Y++FLAQ Y +++ F+ YL+Y++YWREPEY +++ YP CL
Sbjct: 13 DKSRFEIELEFVQMLSNPWYLNFLAQHKYFEDEAFLQYLEYMEYWREPEYVKFIIYPTCL 72
Query: 511 HFLELLQHEAFRRECVSAQVCKFMDDQAILLW 606
H L LL++ FR + A + K ++D+ W
Sbjct: 73 HMLTLLKNPQFRNDISRADLSKQVNDEIYYEW 104
>UniRef50_Q5K785 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=1; Filobasidiella
neoformans|Rep: Mediator of RNA polymerase II
transcription subunit 31 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 180
Score = 105 bits (252), Expect = 9e-22
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +1
Query: 313 PETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYL 492
PE + N +RFQ ELEF+QCLA+P Y+H L +GYL + F+NYLKYL+YWREP+Y R++
Sbjct: 24 PE-KHANLVRFQSELEFIQCLAHPQYLHELHIQGYLGKPAFLNYLKYLEYWREPQYVRFI 82
Query: 493 KYPMCLHFLELLQHEAFR 546
YP CL +L LLQ E FR
Sbjct: 83 IYPTCLVYLTLLQTELFR 100
>UniRef50_Q5CUD3 Cluster: SOH1 family protein; n=2;
Cryptosporidium|Rep: SOH1 family protein -
Cryptosporidium parvum Iowa II
Length = 119
Score = 104 bits (250), Expect = 2e-21
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +1
Query: 322 EEQNRI-RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKY 498
E++N I RF +ELEFVQCL+NP+Y+ +L++ GY ++++FVNYLKYL YW E Y +Y+ Y
Sbjct: 12 EDENPIARFSLELEFVQCLSNPDYLQWLSKEGYFEDESFVNYLKYLLYWCEFPYVKYISY 71
Query: 499 PMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLW 606
P C+ L LLQ E FR+ +V + + +Q W
Sbjct: 72 PHCIKMLRLLQIEDFRKNLSKEEVIQIIREQQTYQW 107
>UniRef50_A7AMM2 Cluster: SOH1 family protein; n=1; Babesia
bovis|Rep: SOH1 family protein - Babesia bovis
Length = 125
Score = 104 bits (250), Expect = 2e-21
Identities = 44/106 (41%), Positives = 68/106 (64%)
Frame = +1
Query: 310 MPETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARY 489
M + E +++RF+ ELEFVQCL NP+Y+HFLA RGY +++ F Y+ YLQY+R P+Y +Y
Sbjct: 19 MIDAEHNDQMRFEAELEFVQCLGNPHYLHFLATRGYFEDRRFRAYISYLQYFRLPQYIQY 78
Query: 490 LKYPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRR 627
+KYP C+ LELL ++F + + ++ Q + W + R
Sbjct: 79 VKYPYCIRILELLLDDSFVQSLSNQMAIDAIEHQLMAHWICFKHER 124
>UniRef50_UPI000049A1C3 Cluster: SOH1 protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: SOH1 protein - Entamoeba
histolytica HM-1:IMSS
Length = 135
Score = 102 bits (245), Expect = 6e-21
Identities = 42/97 (43%), Positives = 68/97 (70%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCLHFL 519
RF+ EL+F+Q LANP+YI +LA YL++ +++LKYLQYW++P Y ++++YP CL++L
Sbjct: 18 RFEYELDFLQSLANPHYIQYLAYHKYLRKTDMIHFLKYLQYWKQPNYIKFIQYPACLYYL 77
Query: 520 ELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRT 630
E LQ+ FR+ C + ++ K + DQ + +Y RT
Sbjct: 78 EQLQNPDFRQACENPEIMKNIIDQHEAHFTYYKVNRT 114
>UniRef50_Q59P87 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=3; Saccharomycetales|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Candida albicans (Yeast)
Length = 146
Score = 102 bits (244), Expect = 9e-21
Identities = 40/89 (44%), Positives = 61/89 (68%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCLHFL 519
R+++ELEFVQ L+N Y+++LAQ Y ++ F+NYL YLQYW +PEY+++L YP CLH L
Sbjct: 30 RWEIELEFVQSLSNIPYVNYLAQNNYFNDENFINYLNYLQYWTQPEYSKFLVYPNCLHIL 89
Query: 520 ELLQHEAFRRECVSAQVCKFMDDQAILLW 606
+LLQ E FR+ ++ + + + W
Sbjct: 90 KLLQDENFRKNIINQDFMNSLMNDMVKRW 118
>UniRef50_Q6BUN9 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=1; Debaryomyces
hansenii|Rep: Mediator of RNA polymerase II
transcription subunit 31 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 135
Score = 101 bits (241), Expect = 2e-20
Identities = 44/95 (46%), Positives = 61/95 (64%)
Frame = +1
Query: 322 EEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYP 501
EE R+++ELEFVQ LAN Y++ LAQ YL F+NY++YL YW+EPEY++YL YP
Sbjct: 2 EESLPKRWEIELEFVQSLANIQYLNHLAQNNYLSNPEFLNYIEYLNYWKEPEYSKYLVYP 61
Query: 502 MCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLW 606
CLH L LLQ+E FR+ + + + + W
Sbjct: 62 NCLHILTLLQNEEFRKNILIPDFMNTVMNDMVKRW 96
>UniRef50_A2EJQ8 Cluster: SOH1 family protein; n=1; Trichomonas
vaginalis G3|Rep: SOH1 family protein - Trichomonas
vaginalis G3
Length = 211
Score = 99 bits (238), Expect = 5e-20
Identities = 43/101 (42%), Positives = 62/101 (61%)
Frame = +1
Query: 325 EQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPM 504
E+N+ RF +ELEFVQ LANP Y++FLA + Y + F +L+YL YW P+Y++Y++YP
Sbjct: 55 EENKKRFVMELEFVQSLANPQYLNFLASQNYFNDPAFCRFLQYLLYWDTPKYSKYIRYPQ 114
Query: 505 CLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRR 627
CL FL LQ FR ++ + +D W +Y R R
Sbjct: 115 CLFFLHQLQDPNFRTFLLNTNNIRNIDTCTYQYWAYYMRNR 155
>UniRef50_A0EB68 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 93.1 bits (221), Expect = 5e-18
Identities = 38/69 (55%), Positives = 54/69 (78%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCLHFL 519
RFQ++LEFVQ LANP YI+ LA + Y ++ FVNYL+YL Y++ PE+ +Y+KYP+C+ L
Sbjct: 10 RFQMDLEFVQLLANPQYIYQLATKQYFEDDQFVNYLQYLLYFKRPEFLKYIKYPVCIKML 69
Query: 520 ELLQHEAFR 546
+ LQ+E FR
Sbjct: 70 DCLQNEEFR 78
>UniRef50_Q00RX9 Cluster: SOH1-like protein; n=3; Ostreococcus|Rep:
SOH1-like protein - Ostreococcus tauri
Length = 560
Score = 87.0 bits (206), Expect = 3e-16
Identities = 41/103 (39%), Positives = 55/103 (53%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCLHFL 519
RF++ELEFVQ LANP Y HFLA G+L + + ++ +LQY+ PEYARY+ YP L F
Sbjct: 14 RFELELEFVQALANPAYAHFLAVEGFLDDDRLIQFIHHLQYFERPEYARYVLYPHALAFR 73
Query: 520 ELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRTRTLQPP 648
L FRR + + + + W R R PP
Sbjct: 74 RALTSRRFRRAMANPRFARRCAETQRATWARGPGRGARDSDPP 116
>UniRef50_Q8SU76 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=1; Encephalitozoon
cuniculi|Rep: Mediator of RNA polymerase II
transcription subunit 31 - Encephalitozoon cuniculi
Length = 103
Score = 86.6 bits (205), Expect = 5e-16
Identities = 37/89 (41%), Positives = 53/89 (59%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCLHFL 519
RF+ ELEFVQ L NP+Y+ +L + G+ + + F +YL+YL+YWR PEY+R+L YP CL L
Sbjct: 5 RFERELEFVQLLCNPDYLRWLTREGHFESEEFRSYLRYLEYWRSPEYSRFLTYPQCLAVL 64
Query: 520 ELLQHEAFRRECVSAQVCKFMDDQAILLW 606
E L E + +Q +W
Sbjct: 65 EHLNSENINDMLSDENFFLALGEQQYFIW 93
>UniRef50_Q4P308 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=1; Ustilago maydis|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Ustilago maydis (Smut fungus)
Length = 153
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +1
Query: 316 ETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLK 495
+ + N+ F +LEF+ LANP Y++ LA G L +F YLKYL Y+R P+Y +YL
Sbjct: 24 QRRQANQAAFSRDLEFLSSLANPYYLNHLALSGALSSPSFKRYLKYLDYFRHPKYVKYLH 83
Query: 496 YPMCLHFLELLQH-EAFRREC 555
YP LHFL+LLQ+ E FR C
Sbjct: 84 YPQALHFLDLLQNEEEFRLAC 104
>UniRef50_Q7RRL4 Cluster: Putative uncharacterized protein PY00705;
n=5; Plasmodium|Rep: Putative uncharacterized protein
PY00705 - Plasmodium yoelii yoelii
Length = 133
Score = 83.4 bits (197), Expect = 4e-15
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +1
Query: 328 QNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMC 507
+N++RF+ ELEFVQ L+N YI +L Y ++ F+NYLKYL YWR Y Y+K P+C
Sbjct: 34 ENKLRFETELEFVQSLSNIEYIKYLYDNKYFNDKKFLNYLKYLNYWRSKPYIFYIKIPIC 93
Query: 508 LHFLELL 528
L+ LE+L
Sbjct: 94 LYVLEIL 100
>UniRef50_Q7SF81 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=5; Pezizomycotina|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Neurospora crassa
Length = 134
Score = 83.4 bits (197), Expect = 4e-15
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYP-MCLHF 516
RF++ELEFVQ L NP Y++ LA R L F+ YL YLQYW P Y +Y+ YP L
Sbjct: 33 RFELELEFVQALGNPLYLNHLASRKLLSNPAFIAYLDYLQYWSRPPYLKYITYPGPTLKN 92
Query: 517 LELLQHEAFRRECVS 561
LELLQ E FR++ +S
Sbjct: 93 LELLQQEKFRQDIIS 107
>UniRef50_Q22Y25 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 169
Score = 79.0 bits (186), Expect = 9e-14
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCLHFL 519
RFQ++LEFV LANP YI L + Y + F NYLKYL Y+++PEY +++KYP+ + L
Sbjct: 58 RFQLDLEFVNMLANPYYILQLQEYDYFSNERFQNYLKYLSYFKQPEYFKFVKYPLGIKML 117
Query: 520 ELLQHEAF 543
+L+Q + F
Sbjct: 118 DLIQQDKF 125
>UniRef50_A6SAU9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 135
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRG---YLKEQTFVNYLKYLQYWREPEYARYLKYP-MC 507
RF++ELEF+ +++P+Y+ LA L F+ YLKYLQY+ +P Y ++L YP
Sbjct: 37 RFEIELEFINAISSPHYLMHLASLSSGTLLSSPPFIAYLKYLQYFTQPPYLKFLTYPGPS 96
Query: 508 LHFLELLQHEAFRRECVSAQVCKFMDDQ 591
L LELLQ+E FRR+C+S + + ++
Sbjct: 97 LKHLELLQNENFRRDCLSIDIISLLANE 124
>UniRef50_Q7R0S3 Cluster: GLP_186_71912_71520; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_186_71912_71520 - Giardia lamblia
ATCC 50803
Length = 130
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = +1
Query: 331 NRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCL 510
+ IR Q +LEFV LAN Y+ L Y ++++F YL+YLQY R PEY+ Y+KYP L
Sbjct: 7 DHIRLQADLEFVHLLANLEYVQSLLDAQYFEDESFRAYLRYLQYVRRPEYSCYVKYPRAL 66
Query: 511 HFLELLQHEAF 543
+ LE L AF
Sbjct: 67 YMLEKLTEPAF 77
>UniRef50_P38633 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=5; Saccharomycetales|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 72.5 bits (170), Expect = 8e-12
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = +1
Query: 319 TEEQNRI--RFQVELEFVQCLANPNYI-HFLAQRGYLKEQTFVNYLKYLQYWREPEYARY 489
+ +QN + RF+VELEF+Q LAN Y+ + L Q+ K F NYLKYL+YW P Y++
Sbjct: 13 SSDQNPLPTRFEVELEFIQSLANIQYVTYLLTQQQIWKSPNFKNYLKYLEYWCNPPYSQC 72
Query: 490 LKYPMCLHFLELL 528
+ YP CL L+LL
Sbjct: 73 IVYPNCLFILKLL 85
>UniRef50_Q4UBF0 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 1347
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYAR 486
RF+VELEFVQCL++ Y+ +L+ GY K++ F Y+ YLQYWR EY +
Sbjct: 12 RFEVELEFVQCLSDVYYLKYLSDEGYFKDERFRAYILYLQYWRTHEYIK 60
>UniRef50_A7TR40 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 134
Score = 63.7 bits (148), Expect = 4e-09
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Frame = +1
Query: 316 ETEEQNRIRFQVELEFVQCLANPNYIHFLA-------QRG--YLKEQTFVNYLKYLQYWR 468
+ EE RF+VELEFVQ LAN Y+ +L Q+G K+ F NYLKYL+YW
Sbjct: 13 DVEELLPTRFEVELEFVQSLANIPYVTYLLTQNTSKNQQGTQIYKDPKFKNYLKYLEYWC 72
Query: 469 EPEYARYLKYPMCLHFLELL 528
EP Y++ + YP L L+L+
Sbjct: 73 EPPYSQCIVYPNALFVLKLI 92
>UniRef50_Q0CQK7 Cluster: Mediator of RNA polymerase II
transcription subunit 31; n=8; Eurotiomycetidae|Rep:
Mediator of RNA polymerase II transcription subunit 31 -
Aspergillus terreus (strain NIH 2624)
Length = 160
Score = 56.4 bits (130), Expect = 6e-07
Identities = 39/98 (39%), Positives = 48/98 (48%), Gaps = 21/98 (21%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLA-------------------QRGYLKEQTFVNYLKYL-Q 459
RF +ELEFV LANP Y+ LA G Q F YL YL
Sbjct: 21 RFTLELEFVSSLANPYYLSHLAVNYPNLLGINKSGDDNDTNDSGDPDAQAFAAYLAYLYS 80
Query: 460 YWREPEYARYLKYP-MCLHFLELLQHEAFRRECVSAQV 570
YW+ PEYA++L +P L L LLQ + FRR+ + QV
Sbjct: 81 YWKTPEYAQFLTHPGATLRALRLLQEDTFRRDIIRPQV 118
>UniRef50_UPI00005A0ADA Cluster: PREDICTED: similar to Mediator of
RNA polymerase II transcription subunit 31 (Mediator
complex subunit SOH1) (hSOH1); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Mediator of RNA
polymerase II transcription subunit 31 (Mediator complex
subunit SOH1) (hSOH1) - Canis familiaris
Length = 220
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/35 (65%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +1
Query: 295 MAGKVMPETEEQ-NRIRFQVELEFVQCLANPNYIH 396
MA V ET++ NR+RFQ+ELEFVQCLANPNY++
Sbjct: 124 MAAAVAMETDDAGNRLRFQLELEFVQCLANPNYLN 158
Score = 39.1 bits (87), Expect = 0.091
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 556 VSAQVCKFMDDQAILLWHHYTRRRTRTLQ 642
V+AQ KF+D+Q IL W HY+R+R R Q
Sbjct: 178 VNAQCAKFIDEQQILHWQHYSRKRMRLQQ 206
>UniRef50_A6RGM4 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 172
Score = 50.8 bits (116), Expect = 3e-05
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 26/103 (25%)
Frame = +1
Query: 340 RFQVELEFVQCLANPNYIHFLA---------------QRGYLKE---------QTFVNYL 447
RF +ELEFV LANP+Y+ LA R + Q+F YL
Sbjct: 18 RFTLELEFVLSLANPHYVSHLAITYPHLLGVSSSSSSSRAAIDNSTSTPISDAQSFAAYL 77
Query: 448 KYL-QYWREPEYARYLKYP-MCLHFLELLQHEAFRRECVSAQV 570
YL YW++PEY ++L +P L L LLQ E+FR+ + QV
Sbjct: 78 AYLYSYWKQPEYVQFLTHPGATLRALRLLQDESFRQAVIRPQV 120
>UniRef50_A7S237 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 305
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 337 IRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMCLHF 516
++ L +V CL + +++++ LK +NY+ L++ Y R LK+ L++
Sbjct: 23 LKHHASLNYVSCLKHHASLYYVS---CLKHHASLNYVSCLKHHASLNYVRCLKHHASLYY 79
Query: 517 LELLQHEA 540
+ L+H A
Sbjct: 80 VSCLKHHA 87
>UniRef50_A7QMC6 Cluster: Chromosome undetermined scaffold_125,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_125, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 903
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +1
Query: 436 VNYLKYLQYWREPEYARYLKYP----MCLHF-LELLQHEAFRRECVSAQVCKFMDDQAIL 600
V +L+Y Y+ + EY+ P + H ELL +C +C+ D+ I
Sbjct: 123 VRFLEYDLYYMKSEYSDLQDLPRPRFLATHLPYELLPPSIKDSKCRIVYMCRNPVDKFIS 182
Query: 601 LWHHYTRRRTRTLQP 645
LWH R LQP
Sbjct: 183 LWHFVNHNRPEPLQP 197
>UniRef50_Q0IL16 Cluster: ORF103; n=4; Nucleopolyhedrovirus|Rep:
ORF103 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 348
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 497 IPCVCIFWSYYNMKHLEENVYRHKFANSWTIKQYCYG 607
I CV I WSY + +H+ E++YR + + K C G
Sbjct: 203 IGCVLILWSYGSERHVSESMYRTRLDKNLFHKIICGG 239
>UniRef50_Q4Y5H1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 115
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 373 LANPNYI---HFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLKYPMC 507
L N NY+ ++L R YLK + ++ YL+ + Y RYLK C
Sbjct: 67 LKNWNYLKNRNYLKNRNYLKNRNYLKNRNYLKNRKYQNYLRYLKNKNC 114
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,685,916
Number of Sequences: 1657284
Number of extensions: 11662589
Number of successful extensions: 28606
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 27317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28533
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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