Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m06f
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-3|CAB04242.1|  163|Caenorhabditis elegans Hypothetical pr...   142   1e-34
Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z81568-16|CAB76729.1|  215|Caenorhabditis elegans Hypothetical p...    28   6.6  
AL032671-1|CAA21777.2|  215|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    27   8.7  
AC006644-5|AAF39834.1|  786|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z81523-3|CAB04242.1|  163|Caenorhabditis elegans Hypothetical
           protein F32H2.2 protein.
          Length = 163

 Score =  142 bits (345), Expect = 1e-34
 Identities = 62/111 (55%), Positives = 77/111 (69%)
 Frame = +1

Query: 316 ETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLK 495
           E+ E  + RF+VE EFVQ LANPNY++FLAQRGY KE+ FVNYLKYL YW++P+YAR LK
Sbjct: 2   ESVESEKTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKDPQYARCLK 61

Query: 496 YPMCLHFLELLQHEAFRRECVSAQVCKFMDDQAILLWHHYTRRRTRTLQPP 648
           +P CLH LE LQ + FR         KF++DQ +L W  Y R+R R    P
Sbjct: 62  FPQCLHMLEALQSQQFRDSMAYGPSAKFVEDQVVLQWQFYLRKRHRLCMMP 112


>Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical
           protein K03D3.14 protein.
          Length = 281

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 480 IFWLSPILQIFKIVYKSLFFKI 415
           IFWL+  + +FK++Y SLF  I
Sbjct: 202 IFWLTIFIVVFKVIYISLFTTI 223


>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
            protein Y46G5A.4 protein.
          Length = 2145

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 9    CVTLCRTRKKIYTQIYLCD 65
            CV +C+T K+ Y + +LCD
Sbjct: 1701 CVVMCQTSKRAYYKKFLCD 1719


>Z81568-16|CAB76729.1|  215|Caenorhabditis elegans Hypothetical
           protein 3R5.1 protein.
          Length = 215

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 ECVSAQVCKFMDDQAILLWHHY 615
           EC  A  CKF DD+   L+H Y
Sbjct: 6   ECRLAVACKFQDDRYYKLFHQY 27


>AL032671-1|CAA21777.2|  215|Caenorhabditis elegans Hypothetical
           protein 3R5.1 protein.
          Length = 215

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 ECVSAQVCKFMDDQAILLWHHY 615
           EC  A  CKF DD+   L+H Y
Sbjct: 6   ECRLAVACKFQDDRYYKLFHQY 27


>Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical
           protein C40H1.9 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -2

Query: 204 DQNNNIFSGYTRQFILSLYKYVIFKIL 124
           +QNN I  G TR+++L L+  ++  ++
Sbjct: 142 NQNNQILEGMTREYVLILFFIILVSVV 168


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
           protein F39C12.1 protein.
          Length = 5105

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 418 LKEQTFVNYLKYLQYWREPEYARYLKY 498
           L+E TF+  L++L YW    + R + Y
Sbjct: 875 LRESTFIRRLEHLMYWGRRRHERDILY 901


>AC006644-5|AAF39834.1|  786|Caenorhabditis elegans Hypothetical
           protein F55A3.2 protein.
          Length = 786

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = -3

Query: 365 TNSSST*NLIRFCSSVSGITFPAIILN--PKYMQLEYLNYSKLNKLV--SGVRLNKS 207
           T+S+ +  ++R CSS S   FP  +LN  P++ ++E+  +  L  +   S  +L KS
Sbjct: 418 TSSTESRIILRPCSSPSDEQFPYCVLNAIPEHFEVEHALFDILEAMTDDSEFKLEKS 474


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,118
Number of Sequences: 27780
Number of extensions: 306478
Number of successful extensions: 805
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)