Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m06f
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   4.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.9  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   7.8  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +2

Query: 509 CIFWSYYNMKHLEE--NVYRHKFANSWTIKQYCY 604
           C+  S  N  HL+   NVY+++ AN     +YC+
Sbjct: 26  CVNKSMLN-SHLKSHSNVYQYRCANCTYATKYCH 58


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 497 IPCVCIFWSYYNMKHLEENVYRHKFAN 577
           IPC+ + + YYN+     N  R   AN
Sbjct: 354 IPCIIMVFLYYNIFKALRNRARKARAN 380


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 514 FLELLQHEAFRRECVSAQVCKFMDDQAILLW 606
           F++LL+H    R  V   + K M  QA++L+
Sbjct: 80  FMQLLKHGMLPRGQVFTMMNKEMRHQAVVLF 110


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 514 FLELLQHEAFRRECVSAQVCKFMDDQAILLW 606
           F++LL+H    R  V   + K M  QA++L+
Sbjct: 80  FMQLLKHGMLPRGQVFTMMNKEMRHQAVVLF 110


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 338 IRFCSSVSGITFPAIILNPKYMQLEYLNYSKLNKLVS 228
           IR+C    G+TF   I   + +Q E ++   + K ++
Sbjct: 37  IRYCIIHMGLTFKDFIKMQELLQEEDISEGNIKKYLT 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,003
Number of Sequences: 438
Number of extensions: 3374
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)