Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m04f
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 113 5e-26
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 113 5e-26
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 113 5e-26
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 111 2e-25
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 111 2e-25
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 111 2e-25
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 111 2e-25
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 53 7e-08
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958... 29 1.0
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 29 1.4
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 29 1.8
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 29 1.8
03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058 29 1.8
12_02_0879 + 23960084-23961551,23961796-23962184 28 2.4
01_01_1106 + 8750597-8754031 28 2.4
05_05_0226 + 23442971-23443857,23444209-23446324 28 3.1
02_01_0043 + 300122-300907,301447-301722,302347-302481 28 3.1
11_06_0050 + 19631164-19631987,19632103-19634023 27 4.1
03_05_0671 + 26608953-26609671,26609775-26610495 27 7.2
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 27 7.2
11_01_0266 - 2010572-2011879 26 9.6
03_01_0004 + 41829-42203,42376-42474,42699-42743,43604-43741,438... 26 9.6
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 113 bits (272), Expect = 5e-26
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 216
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 217 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 339
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 113 bits (272), Expect = 5e-26
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 216
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 217 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 339
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 113 bits (272), Expect = 5e-26
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 216
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 217 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 339
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 111 bits (267), Expect = 2e-25
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 46 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 219
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 220 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 339
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 111 bits (267), Expect = 2e-25
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 46 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 219
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 220 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 339
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 111 bits (267), Expect = 2e-25
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 46 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 219
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 29 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 88
Query: 220 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 339
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 89 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 111 bits (267), Expect = 2e-25
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 46 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 219
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 220 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 339
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 90 AKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 53.2 bits (122), Expect = 7e-08
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 238 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 339
IVL+L+C CK SQ +KRCKHF++GGDKK KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>03_04_0037 +
16694760-16695227,16695563-16695642,16695735-16695828,
16695973-16696071,16696650-16696742,16696822-16696941,
16697422-16697525,16697734-16697806,16698023-16698085
Length = 397
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 188 VVSPNPSSKRRQKPLRKLCSVLSVPIAR 271
VV+P P +R+Q+PL C S+P R
Sbjct: 58 VVAPAPRHRRKQRPLHYACRPTSLPCRR 85
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 116 STKSPRKGTLPRVEDVMIVNSRV 184
++ SP+K T PRVED M++ S +
Sbjct: 451 ASSSPQKQTAPRVEDDMVITSSI 473
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 62 SAGRTAKNVNATKYTRYHSTKSPRKGTLPR 151
S+GRTA++ + R+H T RKG LPR
Sbjct: 99 SSGRTARDAAVAQQERHHDTIKRRKG-LPR 127
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 157 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 303
+ + + QG GG S +F ++LE ADC + +V RCK
Sbjct: 207 KELEGRLQGIGGFSNCLFTFLFAGVSMDEVKLEQADCDMDERVYCDRCK 255
>03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058
Length = 339
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -2
Query: 382 QWSYLLEAFKIGSSVPFSSCHHRAQSACISSMQPVISPCNRH 257
+W + E F+ G+ S H R S+C P P ++H
Sbjct: 138 RWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQH 179
>12_02_0879 + 23960084-23961551,23961796-23962184
Length = 618
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 50 TYQNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKP 229
T ++S G +K V ATK+ R +S +P+V+++ V S TV+ + S RQ
Sbjct: 315 TIESSNG--SKVVRATKFNRDKKFRSTVASNVPKVKEIK-VTSPATVMDQS-SKPTRQSK 370
Query: 230 LRKL 241
L+ L
Sbjct: 371 LKSL 374
>01_01_1106 + 8750597-8754031
Length = 1144
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1
Query: 173 LRS*RLLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRC 60
L+S LL C +L+ L DT+C+L +LHFL + RC
Sbjct: 540 LQSLHLLNLKGCGNLEILP-DTICSLQNLHFLN-LSRC 575
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 161 RLLPWAACLSLDFLYCDTLCTLWHLHFLQY 72
R+L C LD + +C LWHL +L +
Sbjct: 595 RVLDLQECSDLDDDHLKYICKLWHLKYLSF 624
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 341 CPFLFLSPPSSKCLHLFNATCDLTLQSAH 255
CP F SPPSS C F ++ DL H
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDLDAAFHH 73
>11_06_0050 + 19631164-19631987,19632103-19634023
Length = 914
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -1
Query: 161 RLLPWAACLSLDFLYCDTLCTLWHLHFLQ 75
R+L ++ C ++ +C +C L+HL +L+
Sbjct: 577 RVLDFSGCDKVENQHCKDICKLFHLRYLR 605
>03_05_0671 + 26608953-26609671,26609775-26610495
Length = 479
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 283 VALKRCKHFELGGDKKRKGQMIQF*MLLINK 375
+A + CKHFE + R G I+ ++ INK
Sbjct: 357 IAAQDCKHFEAASYEDRNGNSIRNVIVPINK 387
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 92 ATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSS 211
+T T + + K P G++ + NS V +V P PS+
Sbjct: 821 STNITNFANLKEPFDGSIDLANVENVTNSNVVMVQPVPST 860
>11_01_0266 - 2010572-2011879
Length = 435
Score = 26.2 bits (55), Expect = 9.6
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 112 SQYKKSKERHAAQGRRRYDR 171
S+ +K+++RH A+G+ YD+
Sbjct: 3 SEKRKTRDRHGARGKASYDK 22
>03_01_0004 +
41829-42203,42376-42474,42699-42743,43604-43741,
43852-44157,44779-45689,45826-46093
Length = 713
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 256 CADCKVRSQVALKRCKHFELGGDKKRKGQ 342
C CK + RC + GDKKR GQ
Sbjct: 93 CESCKAMCKANDCRCDSWVFCGDKKRCGQ 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,391,893
Number of Sequences: 37544
Number of extensions: 199946
Number of successful extensions: 575
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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