BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11m04f (395 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 24 1.8 DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 24 1.8 AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 23 4.1 AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 23 4.1 >DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein 183 protein. Length = 315 Score = 24.2 bits (50), Expect = 1.8 Identities = 11/32 (34%), Positives = 14/32 (43%) Frame = -1 Query: 344 ICPFLFLSPPSSKCLHLFNATCDLTLQSAHSR 249 +C F+ P +KC H F C L SR Sbjct: 249 VCRESFVDPIVTKCKHYFCERCALAQYKKSSR 280 >DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein 183 protein. Length = 315 Score = 24.2 bits (50), Expect = 1.8 Identities = 11/32 (34%), Positives = 14/32 (43%) Frame = -1 Query: 344 ICPFLFLSPPSSKCLHLFNATCDLTLQSAHSR 249 +C F+ P +KC H F C L SR Sbjct: 249 VCRESFVDPIVTKCKHYFCERCALAQYKKSSR 280 >AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transporter protein. Length = 650 Score = 23.0 bits (47), Expect = 4.1 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 373 YLLEAFKIGSSVPFSSCHHRAQSACISS 290 YL+ +F G +P+S C+ + CI S Sbjct: 181 YLIASF--GDPLPWSECNDAWNATCIDS 206 >AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transporter protein. Length = 650 Score = 23.0 bits (47), Expect = 4.1 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 373 YLLEAFKIGSSVPFSSCHHRAQSACISS 290 YL+ +F G +P+S C+ + CI S Sbjct: 181 YLIASF--GDPLPWSECNDAWNATCIDS 206 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 410,386 Number of Sequences: 2352 Number of extensions: 8835 Number of successful extensions: 9 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 563,979 effective HSP length: 58 effective length of database: 427,563 effective search space used: 31212099 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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