Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m04f
(395 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 130 1e-30
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 130 1e-30
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 130 1e-30
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 130 1e-30
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 130 1e-30
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 130 1e-30
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 130 1e-30
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 129 3e-30
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 129 3e-30
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 129 3e-30
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 129 3e-30
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 129 3e-30
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 129 3e-30
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 129 3e-30
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 129 3e-30
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 129 3e-30
BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein. 44 1e-04
AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein pr... 31 1.8
AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein pr... 29 4.2
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot... 29 4.2
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein. 29 4.2
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 130 bits (315), Expect = 1e-30
Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 130 bits (315), Expect = 1e-30
Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 130 bits (315), Expect = 1e-30
Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 130 bits (315), Expect = 1e-30
Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 130 bits (315), Expect = 1e-30
Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 130 bits (315), Expect = 1e-30
Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 130 bits (315), Expect = 1e-30
Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 129 bits (312), Expect = 3e-30
Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +1
Query: 43 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 222
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 223 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 354
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein.
Length = 25
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 283 VALKRCKHFELGGDKKRKGQMIQF 354
+ +KR KHF+LGGDKKRKGQ+IQF
Sbjct: 2 LTIKRYKHFKLGGDKKRKGQVIQF 25
>AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein
protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 6 LTFVDIVPNELKNGERT--KTAQDVLQKM*MPQSTQGITVQKVQGKARCPG 152
L FV+ NEL+ G T K+ ++LQ Q T +TVQKV C G
Sbjct: 252 LCFVEREANELRRGRSTVTKSIVELLQTTGGIQGTLPLTVQKVLASQACHG 302
>AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein
protein.
Length = 810
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 205 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 98
W+W D+ + D N+F F W C+ IP L
Sbjct: 538 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 572
>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
proteinase 34 protein.
Length = 3395
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 205 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 98
W+W D+ + D N+F F W C+ IP L
Sbjct: 2109 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 2143
>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
Length = 3412
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 205 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 98
W+W D+ + D N+F F W C+ IP L
Sbjct: 2126 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 2160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,423,430
Number of Sequences: 237096
Number of extensions: 1160635
Number of successful extensions: 2475
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2459
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -