Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m03f
(561 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.10
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 26 0.73
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 26 0.73
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 26 0.97
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 24 3.0
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 24 3.9
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 5.2
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 23 5.2
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 6.8
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 23 9.0
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 23 9.0
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 29.1 bits (62), Expect = 0.10
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 110 DGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWCESRR 232
D A QH+ RP+RS + NP GR H C+SRR
Sbjct: 273 DENPAGAQQHLSHRPQRSTRKNP------AGRQHDRCDSRR 307
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 26.2 bits (55), Expect = 0.73
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 284 NGDATVLFVLTRVSETGLSGSRTSND 207
+GD T L +T ++E+G+ S TS D
Sbjct: 194 SGDETDLDAITTLAESGIPSSNTSGD 219
Score = 25.0 bits (52), Expect = 1.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 208 SLLVREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 318
S L + PER SLT++ + + AS L S SS+L
Sbjct: 666 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 702
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 26.2 bits (55), Expect = 0.73
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 284 NGDATVLFVLTRVSETGLSGSRTSND 207
+GD T L +T ++E+G+ S TS D
Sbjct: 195 SGDETDLDAITTLAESGIPSSNTSGD 220
Score = 25.0 bits (52), Expect = 1.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 208 SLLVREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 318
S L + PER SLT++ + + AS L S SS+L
Sbjct: 667 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 703
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.8 bits (54), Expect = 0.97
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 397 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDL 284
+++L+KKP SL S W + N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 24.2 bits (50), Expect = 3.0
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 553 NRIGLMRSAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSA 437
N +GL RS A S SV P + T RAP +A
Sbjct: 3 NALGLTRSMSADTSKTSVGKQLPASGIPTLRAPMAAGNA 41
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 23.8 bits (49), Expect = 3.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 505 SVCTHTPDTQSTTTRAPS 452
SV H PDT+ T + PS
Sbjct: 135 SVIAHNPDTKRTRVKLPS 152
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.4 bits (48), Expect = 5.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 125 EYPQHVCDRPRRSRQVNPHGLVGFQG 202
++P HVC+R R+ +N +V G
Sbjct: 350 QHPLHVCERFERASVINREEIVRKHG 375
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 23.4 bits (48), Expect = 5.2
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 514 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST-CPGES 395
+TV+ T T +TTT AP+ T + A +T PG++
Sbjct: 34 TTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQT 74
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.0 bits (47), Expect = 6.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 499 CTHTPDTQSTTTRAPSVTRSAAVTS 425
CT++ D+ +TTT S + S+ T+
Sbjct: 471 CTYSSDSTTTTTTTKSASTSSHSTT 495
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 481 CLVCVYKLKQYCVRL 525
C+VC + Q CVRL
Sbjct: 354 CVVCDFTCHQQCVRL 368
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +2
Query: 98 DPWDDGQEAEYPQHVCDRPRRSRQVNP 178
D WDD + E+ + D P + P
Sbjct: 248 DDWDDEMDGEWEPPMIDNPEYKGEWKP 274
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,468
Number of Sequences: 2352
Number of extensions: 11642
Number of successful extensions: 29
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -