Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11m03f
(561 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 197 4e-51
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 103 6e-23
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 90 1e-18
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 90 1e-18
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 88 3e-18
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 85 2e-17
At5g13650.2 68418.m01585 elongation factor family protein contai... 79 2e-15
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 79 2e-15
At5g13650.1 68418.m01584 elongation factor family protein contai... 77 6e-15
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 72 3e-13
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 61 4e-10
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 61 4e-10
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 51 6e-07
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 37 0.008
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 36 0.024
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 36 0.024
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 36 0.024
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 36 0.024
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 35 0.043
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 31 0.70
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 31 0.70
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 30 0.92
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.2
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 30 1.2
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 29 1.6
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 2.1
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 2.8
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 28 3.7
At3g28790.1 68416.m03593 expressed protein 27 6.5
At3g08670.1 68416.m01007 expressed protein 27 6.5
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 27 6.5
At1g12080.2 68414.m01397 expressed protein 27 6.5
At1g12080.1 68414.m01396 expressed protein 27 6.5
At5g23160.1 68418.m02708 expressed protein ; expression supporte... 27 8.6
At1g71160.1 68414.m08211 beta-ketoacyl-CoA synthase family prote... 27 8.6
At1g33970.1 68414.m04212 avirulence-responsive protein, putative... 27 8.6
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 197 bits (481), Expect = 4e-51
Identities = 103/162 (63%), Positives = 122/162 (75%)
Frame = +3
Query: 75 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 254
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 255 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVT 434
DE +R ITIKST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVT
Sbjct: 61 ADEAERGITIKSTGISLYYEMTDESLKSFTG--ARDGNE--YLINLIDSPGHVDFSSEVT 116
Query: 435 AALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMN 560
AALR+TDGAL QTETVLRQA+ ERI+P+L +N
Sbjct: 117 AALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVN 158
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 103 bits (248), Expect = 6e-23
Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 123 RNIRNMSVIAHVDHGKSTLTDSLVSKAG--IIAGARAGETRFTDTRKDEQDRCITIKSTA 296
R +RN+ ++AHVDHGK+TL D L++ +G ++ AG+ RF D +EQ R IT+KS++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMKSSS 66
Query: 297 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 476
IS+ + K + +NLIDSPGH+DF SEV+ A R++DGAL
Sbjct: 67 ISLKY--------------------KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVD 106
Query: 477 XXXXXXXQTETVLRQAIAERIKPILFMN 560
QT VLRQA E++ P L +N
Sbjct: 107 AVEGVHIQTHAVLRQAWIEKLTPCLVLN 134
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 89.8 bits (213), Expect = 1e-18
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Frame = +3
Query: 105 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 275
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 276 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 455
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 456 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMN 560
GA+ TE +R AI + + ++ +N
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVIN 269
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 89.8 bits (213), Expect = 1e-18
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Frame = +3
Query: 105 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 275
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 276 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 455
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 456 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMN 560
GA+ TE +R AI + + ++ +N
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVIN 269
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 88.2 bits (209), Expect = 3e-18
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Frame = +3
Query: 105 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET---RFTDTRKDEQDRC 275
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERN 175
Query: 276 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 455
I+IK+ +S+ E D R KS +L N++D+PG+V+FS E+TA+LR+ D
Sbjct: 176 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGNVNFSDEMTASLRLAD 220
Query: 456 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMN 560
GA+ TE +R AI + + ++ +N
Sbjct: 221 GAVFIVDAAQGVMVNTERAIRHAIQDHLPIVVVIN 255
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 85.4 bits (202), Expect = 2e-17
Identities = 48/112 (42%), Positives = 69/112 (61%)
Frame = +3
Query: 129 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMF 308
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D K +++R IT+K+ +MF
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITVKAQTATMF 122
Query: 309 FELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 464
+E + +D + G+L+NLID+PGHVDFS EV+ +L GAL
Sbjct: 123 YENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQGAL 163
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 79.4 bits (187), Expect = 2e-15
Identities = 48/154 (31%), Positives = 78/154 (50%)
Frame = +3
Query: 66 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 245
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 246 DTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSS 425
D+ E++R ITI S S+ + K +N+ID+PGH DF
Sbjct: 122 DSNDLERERGITILSKNTSITY--------------------KNTKVNIIDTPGHSDFGG 161
Query: 426 EVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 527
EV L + DG L QT VL++A+
Sbjct: 162 EVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 195
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 79.4 bits (187), Expect = 2e-15
Identities = 53/145 (36%), Positives = 73/145 (50%)
Frame = +3
Query: 126 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 305
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R ITIK A M
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQAARM 143
Query: 306 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 485
+ E+ F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 144 RYVYEDTP----------------FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQ 187
Query: 486 XXXXQTETVLRQAIAERIKPILFMN 560
QT + A+ ++ I +N
Sbjct: 188 GVEAQTLANVYLALENNLEIIPVLN 212
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 77.4 bits (182), Expect = 6e-15
Identities = 45/139 (32%), Positives = 72/139 (51%)
Frame = +3
Query: 111 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 290
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 135
Query: 291 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 470
S+ + K +N+ID+PGH DF EV L + DG L
Sbjct: 136 KNTSITY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLV 175
Query: 471 XXXXXXXXXQTETVLRQAI 527
QT VL++A+
Sbjct: 176 VDSVEGPMPQTRFVLKKAL 194
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 71.7 bits (168), Expect = 3e-13
Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Frame = +3
Query: 123 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITIKS 290
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R ITI S
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITITS 151
Query: 291 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 470
A + F++ IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 152 AATTTFWDKHR--------------------INIIDTPGHVDFTLEVERALRVLDGAICL 191
Query: 471 XXXXXXXXXQTETVLRQAIAERIKPILFMN 560
Q+ETV RQA + I F+N
Sbjct: 192 FDSVAGVEPQSETVWRQADKYGVPRICFVN 221
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 61.3 bits (142), Expect = 4e-10
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Frame = +3
Query: 111 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 275
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 276 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 455
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 456 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMN 560
GA+ Q+ TV RQ + + F+N
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFIN 193
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 61.3 bits (142), Expect = 4e-10
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Frame = +3
Query: 111 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 275
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 276 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 455
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 456 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMN 560
GA+ Q+ TV RQ + + F+N
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFIN 193
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/90 (32%), Positives = 45/90 (50%)
Frame = +3
Query: 81 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 260
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A + D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 261 EQDRCITIKSTAISMFFELEEKDLVFITNP 350
E+ R ITI + + +E E + + P
Sbjct: 123 ERARGITINTATVE--YETENRHYAHVDCP 150
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 37.1 bits (82), Expect = 0.008
Identities = 28/110 (25%), Positives = 49/110 (44%)
Frame = +3
Query: 135 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 314
N++++ HVD GKSTL+ L+ G R + + K+ + + + A ++
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLG-----RISQKQMHKYEKEAKLQGKGSFAYAWALDES 295
Query: 315 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 464
EE++ + K + L+DSPGH DF + A D A+
Sbjct: 296 AEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAI 345
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 35.5 bits (78), Expect = 0.024
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 111 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 290
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 291 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 464
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.024
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 111 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 290
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 291 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 464
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.024
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 111 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 290
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 291 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 464
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.024
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 111 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 290
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 291 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 464
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 34.7 bits (76), Expect = 0.043
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 135 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAI 299
N+ I HVDHGK+TLT ++ A+A D +E+ R ITI + +
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 123
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 30.7 bits (66), Expect = 0.70
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 511 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 413
T S T PD ST T APSVT+ + + EK+
Sbjct: 383 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 30.7 bits (66), Expect = 0.70
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 511 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 413
T S T PD ST T APSVT+ + + EK+
Sbjct: 644 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 138 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 239
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +3
Query: 393 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMN 560
+D+PGH F + RVTD A+ QT + A A + ++ +N
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAIN 612
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 148 SPTSITASQPSRTRWFPRPVSLLVRE 225
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2
Query: 533 LGNSLTQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREIN 411
L N + C S Y HTV HKGS D +C ++RE N
Sbjct: 299 LSNRSSDRCRSKY-QLIHTVRTHKGS-DDNAFNCVYQREDN 337
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 166 ASQPSRTRWFPRPVSLLVREPERPVSLTRVR-TNKTVASPLNLRPSLCSSSLKRK 327
A Q S + W PR S + P++ + T+ V+ N PS+ S LKRK
Sbjct: 695 AKQSSSSPWVPRHTSSVAHPPKQENYIKHHNSTSSRVSKESNRTPSVSSYPLKRK 749
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 148 SPTSITASQPSRTRWFPRPVSLLVRE 225
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 138 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 230
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 28.3 bits (60), Expect = 3.7
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +3
Query: 75 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 254
M +F D+IR +D K ++ +H D + ++ R T TR
Sbjct: 484 MKDFVRDQIRAALDPKGKRPEQTIPSH-DSREPPISMDKAPVTAKKPSRRMSTKGSTGTR 542
Query: 255 KDEQDRCIT--IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSS 425
K + ++ + + A+S+ +E+DL PD ++ +GF+ + DF++
Sbjct: 543 KSSRLTRVSHDVDTPALSVGCNSKEEDLDVPGEPDSNKEDMQGFIDEHDGANNESDFTA 601
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.5 bits (58), Expect = 6.5
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = -3
Query: 514 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 335
ST + T TP T + +T APS T +A TSE+ S + K S S SG V
Sbjct: 294 STPTPSTPTPSTPTPSTPAPS-TPAAGKTSEKGSESASMKKESNSKSES-ESAASGSVSK 351
Query: 334 TKSFSSSS 311
TK + S
Sbjct: 352 TKETNKGS 359
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 148 SPTSITASQPSRTRWFPRPVSLLVREPE--RPVSLTRVRTNKTVASPLNLRPSLCSSSL- 318
SP+SI + + + RP S R RP + TR + ++P +RP SSS+
Sbjct: 175 SPSSILNTSSASVSSYIRPSSPSSRSSSSARPSTPTRTSSASRSSTPSRIRPGSSSSSMD 234
Query: 319 KRKI*YSSQTLTSVKR 366
K + SS+ T R
Sbjct: 235 KARPSLSSRPSTPTSR 250
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/102 (22%), Positives = 44/102 (43%)
Frame = +3
Query: 114 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKST 293
+KKR++ N+ I HVD GKST+ ++ +G + + + K+ +D+
Sbjct: 97 NKKRHL-NVVFIGHVDAGKSTIGGQILFLSG-----QVDDRQIQKYEKEAKDKSRESWYM 150
Query: 294 AISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF 419
A M EE+ + + ++D+PGH +
Sbjct: 151 AYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSY 192
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 502 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 410
V T TP + +A VT + AV EEK T
Sbjct: 85 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 115
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 502 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 410
V T TP + +A VT + AV EEK T
Sbjct: 51 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 81
>At5g23160.1 68418.m02708 expressed protein ; expression supported
by MPSS
Length = 271
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 178 SRTRWFPRPVSLLVREPERPVSLTRVRTNK 267
+RTRWF RP +E P S+ + K
Sbjct: 49 TRTRWFSRPTKFRSKEEITPTSIYKSEKQK 78
>At1g71160.1 68414.m08211 beta-ketoacyl-CoA synthase family protein
similar to fatty acid elongase 3-ketoacyl-CoA synthase 1
GB:AAC99312, very-long-chain fatty acid condensing
enzyme CUT1 [GI:5001734]
Length = 460
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 409 CPGESI-KLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDLMVMQRSCSSLRVSVKRV 233
CP SI +I F + S F ++ S+ ++ + DLM + +L +S++ V
Sbjct: 154 CPSPSITSMIINKFGMRSDIKSFSLSGMGCSAGILSVNLVKDLMKIHGDSLALVLSMEAV 213
Query: 232 SP 227
SP
Sbjct: 214 SP 215
>At1g33970.1 68414.m04212 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 342
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 342 TNPDQREKSEKGFLINLIDSPGHVDFSS 425
T QR E G +IN++D+PG D S+
Sbjct: 62 TCESQRVVQEDGDIINVVDTPGLFDLST 89
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,097,889
Number of Sequences: 28952
Number of extensions: 246247
Number of successful extensions: 902
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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