Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11m01r
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.36 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.47 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
 Frame = +1

Query: 271 WHLVYSIPKLSKVTLLQNVG*VFDLRN--CLI---------FHHGFKK*ALAQCKIGMRE 417
           W ++Y++ K+S+V L+Q    V  L+   C++          ++G  K  L+Q +I   E
Sbjct: 167 WIVLYTLSKMSQVMLIQFCAFVVVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQVEIIHNE 226

Query: 418 ISKSFQKYLTCNVCVKLFGIKLI*LEHS*ISSQIVCVFSGLHFDISF*YFQISWIVPFN 594
           I       +T N    +F + L+      I+SQ V +F  L+F I    +    +VP N
Sbjct: 227 I------LVTHNEIQTIFSVPLL----MKIASQFVGIFCSLYFCIFGYIYDDEMVVPQN 275


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -2

Query: 480 FNPEKFNADITCQILLKALTNFPHTDFTLCKCLLLESVVENETIS 346
           F    F AD+           F   DF+LCK +L+ ++    T S
Sbjct: 57  FGSSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFS 101


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 92  RLPSSLHPYFLTQCFNVTSSI 154
           R P  +H YF+   + V SS+
Sbjct: 21  RFPHRIHSYFMVAFYVVFSSV 41


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 92  RLPSSLHPYFLTQCFNVTSSI 154
           R P  +H YF+   + V SS+
Sbjct: 21  RFPHRIHSYFMVAFYVVFSSV 41


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 285 LYSKTEQSHIAPECRLSI*FEKLSHF 362
           +Y + ++  I   CR SI    L+HF
Sbjct: 45  MYHRVKEEPIYESCRFSINQPYLNHF 70


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 633 ETMKQTVASILKSIERYNPANLEILERYVEMQSREN 526
           E     +AS  +  E+Y    L+I   Y E + +EN
Sbjct: 120 ELRANLIASSFEYFEKYGFNGLDIDWEYPEAKDKEN 155


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 285 LYSKTEQSHIAPECRLSI*FEKLSHF 362
           +Y + ++  I   CR SI    L+HF
Sbjct: 45  MYHRVKEEPIYESCRFSINQPYLNHF 70


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 630 FRPLYLSLMLLFIKE 674
           F P+Y+S +L+F+++
Sbjct: 173 FLPVYVSYLLIFVQQ 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,439
Number of Sequences: 336
Number of extensions: 3736
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)