Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l24r
(759 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08080.1 68414.m00884 carbonic anhydrase family protein simil... 57 1e-08
At5g04180.1 68418.m00406 carbonic anhydrase family protein simil... 55 4e-08
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 50 1e-06
At3g52720.1 68416.m05808 carbonic anhydrase family protein low s... 50 2e-06
At4g21000.1 68417.m03039 carbonic anhydrase family protein simil... 45 6e-05
At2g28210.1 68415.m03425 carbonic anhydrase family protein simil... 42 4e-04
At3g52720.2 68416.m05809 carbonic anhydrase family protein low s... 40 0.001
At1g08065.1 68414.m00882 carbonic anhydrase family protein simil... 40 0.002
At2g28100.1 68415.m03413 glycosyl hydrolase family 29 / alpha-L-... 35 0.067
At5g13540.2 68418.m01564 expressed protein HERC2 - Homo sapiens,... 30 1.9
At4g17240.1 68417.m02592 expressed protein 30 1.9
At3g19870.1 68416.m02516 expressed protein 29 2.5
At1g12810.1 68414.m01488 proline-rich family protein contains pr... 29 2.5
At3g52710.1 68416.m05807 expressed protein predicted protein, Ar... 29 4.4
>At1g08080.1 68414.m00884 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 275
Score = 56.8 bits (131), Expect = 1e-08
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Frame = -1
Query: 759 EQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETV 580
+Q+H+H + EH ++G +A E H VH G +AVV L +
Sbjct: 127 QQLHWH------SPSEHTINGRRFALELHMVH-----------EGRNRRMAVVTVLYKI- 168
Query: 579 DAPNPRFDRLVQGLEGIQKRESVMNVTSESLLWMDREDLQIGN--YVTYKGSLTTPPYTE 406
R D ++ LE + + M +++ +D ++IG+ Y Y GSLTTPP T+
Sbjct: 169 ----GRADTFIRSLEKELEGIAEMEEAEKNVGMIDPTKIKIGSRKYYRYTGSLTTPPCTQ 224
Query: 405 CVTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQR 283
VTW + K + +Q+ LLR D+ R V+PT +
Sbjct: 225 NVTWSVVRKVRTVTRKQVKLLRVAVHDDANSNARPVQPTNK 265
>At5g04180.1 68418.m00406 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 277
Score = 55.2 bits (127), Expect = 4e-08
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Frame = -1
Query: 714 EHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVDAPNPRFDRL---VQ 544
EH LDG A E H VH +S+E GH LAV+G L + PN R+ +
Sbjct: 123 EHFLDGQRLAMELHMVH-----KSVE---GH---LAVIGVLFREGE-PNAFISRIMDKIH 170
Query: 543 GLEGIQKRE-SVMNVTSESLLWMDREDLQIGNYVTYKGSLTTPPYTECVTWIIYEKPVQI 367
+ +Q E S+ + W + + Y+GSLTTPP TE V W I K +
Sbjct: 171 KIADVQDGEVSIGKIDPREFGW------DLTKFYEYRGSLTTPPCTEDVMWTIINKVGTV 224
Query: 366 GSEQLGLLRQLEGPDSQPIERNVRPTQRHPPGHSVIYVKQVRS 238
EQ+ +L E+N RP Q P ++Y+ + S
Sbjct: 225 SREQIDVLTDAR---RGGYEKNARPAQ--PLNGRLVYLNEQSS 262
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/143 (27%), Positives = 63/143 (44%)
Frame = -1
Query: 714 EHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVDAPNPRFDRLVQGLE 535
EH ++G Y E H VH +++ + AV+G L + + PN +L+ G++
Sbjct: 131 EHTVNGTRYDLELHMVHTSARGRT-----------AVIGVLYK-LGEPNEFLTKLLNGIK 178
Query: 534 GIQKRESVMNVTSESLLWMDREDLQIGNYVTYKGSLTTPPYTECVTWIIYEKPVQIGSEQ 355
+ +E + + + Q + Y GSLT PP TE V W + ++ I EQ
Sbjct: 179 AVGNKEINLGMIDPREI-----RFQTRKFYRYIGSLTVPPCTEGVIWTVVKRVNTISMEQ 233
Query: 354 LGLLRQLEGPDSQPIERNVRPTQ 286
+ LRQ E N RP Q
Sbjct: 234 ITALRQAV---DDGFETNSRPVQ 253
>At3g52720.1 68416.m05808 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 284
Score = 50.0 bits (114), Expect = 2e-06
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
Frame = -1
Query: 756 QMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVD 577
QMH+H T EH L G YAAE H VH DG V L +
Sbjct: 117 QMHWH------TPSEHHLHGVQYAAELHMVHQAK------------DGSFAVVASLFKIG 158
Query: 576 APNPRFDRLVQGLEGIQKRESVMNVTSESLLW-MDREDLQ--IGNYVTYKGSLTTPPYTE 406
P ++ + L +++ N T++ + +D ++ Y Y GSLTTPP +E
Sbjct: 159 TEEPFLSQMKEKLVKLKEERLKGNHTAQVEVGRIDTRHIERKTRKYYRYIGSLTTPPCSE 218
Query: 405 CVTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQ 286
V+W I K + EQ+ LLR P + N RP Q
Sbjct: 219 NVSWTILGKVRSMSKEQVELLR---SPLDTSFKNNSRPCQ 255
>At4g21000.1 68417.m03039 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 260
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = -1
Query: 714 EHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVDAPNPRFDRLVQGLE 535
EH ++G Y E H VH ++ ++ VVG L + + P+ +++ G++
Sbjct: 132 EHTINGTSYDLELHMVHTSASGKT-----------TVVGVLYK-LGEPDEFLTKILNGIK 179
Query: 534 GIQKRESVMNVTSESLLWMDREDLQI--GNYVTYKGSLTTPPYTECVTWIIYEK 379
G+ K+E + + +D D++ N+ Y GSLT PP TE V W + ++
Sbjct: 180 GVGKKEIDLGI-------VDPRDIRFETNNFYRYIGSLTIPPCTEGVIWTVQKR 226
>At2g28210.1 68415.m03425 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 217
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = -1
Query: 753 MHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVDA 574
+ HW + EH ++G +A E H VH N LAVV L + +
Sbjct: 99 LQLHWH----SPSEHTMNGRRFALELHMVHENIN-----------GSLAVVTVLYK-IGR 142
Query: 573 PNPRFDRLVQGLEGIQKRESVMNVTSESLLWMDREDLQIGN--YVTYKGSLTTPPYTECV 400
P+ L L I + N + + +D D++IG+ + Y GSLTTPP T+ V
Sbjct: 143 PDSFLGLLENKLSAITDQ----NEAEKYVDVIDPRDIKIGSRKFYRYIGSLTTPPCTQNV 198
Query: 399 TWIIYEK 379
W + +K
Sbjct: 199 IWTVVKK 205
>At3g52720.2 68416.m05809 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 230
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Frame = -1
Query: 756 QMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVD 577
QMH+H T EH L G YAAE H VH DG V L +
Sbjct: 117 QMHWH------TPSEHHLHGVQYAAELHMVHQAK------------DGSFAVVASLFKIG 158
Query: 576 APNPRFDRLVQGLEGIQKRESVMNVTSESLLW-MDREDLQ--IGNYVTYKGSLTTPPYTE 406
P ++ + L +++ N T++ + +D ++ Y Y GSLTTPP +E
Sbjct: 159 TEEPFLSQMKEKLVKLKEERLKGNHTAQVEVGRIDTRHIERKTRKYYRYIGSLTTPPCSE 218
Query: 405 CVTWIIYEKPV 373
V+W I K +
Sbjct: 219 NVSWTILGKVI 229
>At1g08065.1 68414.m00882 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 263
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = -1
Query: 453 NYVTYKGSLTTPPYTECVTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQRHPP 274
+Y + GSLTTPP +E V W I ++ + +QL +LR S N RP QR
Sbjct: 192 HYYRFIGSLTTPPCSENVIWTISKEMRTVTLKQLIMLRVTVHDQS---NSNARPLQRKNE 248
Query: 273 GHSVIYVKQVRSKL 232
+Y+ SKL
Sbjct: 249 RPVALYIPTWHSKL 262
>At2g28100.1 68415.m03413 glycosyl hydrolase family 29 /
alpha-L-fucosidase, putative similar to
alpha-L-fucosidase SP:P10901 from [Dictyostelium
discoideum]
Length = 506
Score = 34.7 bits (76), Expect = 0.067
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 557 SNLGLGASTVSRRNPTTANPSGWPTAVSKDSYL--LL*WTKWHSAAYPWPSSTCSHPVKS 730
S G G + S NPT N S W ++KDS ++ K H WPS + VKS
Sbjct: 64 SEWGTGKANPSIFNPTHLNASQW-VQIAKDSGFSRVILTAKHHDGFCLWPSEYTDYSVKS 122
Query: 731 STDQWK 748
S QW+
Sbjct: 123 S--QWR 126
>At5g13540.2 68418.m01564 expressed protein HERC2 - Homo sapiens,
EMBL:AF071172; isoform contains non-consensus GG
acceptor splice site at intron 6
Length = 788
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -1
Query: 480 MDREDLQIGNYVTYKGSLTTPPY 412
++ E+L+IG++V K S+TTP Y
Sbjct: 656 IEEEELKIGDWVRVKASITTPTY 678
>At4g17240.1 68417.m02592 expressed protein
Length = 200
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 690 YAAE-CHFVHYNSKYESLETAVGHPDGLAV 604
Y +E C++ S Y+SLE + G PDGLA+
Sbjct: 96 YLSESCYWQAQTSSYDSLEFSSGSPDGLAL 125
>At3g19870.1 68416.m02516 expressed protein
Length = 1117
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 702 DGHGYAAECHFVHYNSKYESLET-AVGHPDGLAVVGFLLETVDAPNPRFDRLVQGL 538
DG E V + S S+++ +VGH + AVV LL V+ PN FDR + +
Sbjct: 102 DGSSGLKEQAMVSFTSVLVSIDSFSVGHVE--AVVDLLLALVNRPNHGFDRQARAI 155
>At1g12810.1 68414.m01488 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 129
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 519 PSSESPPDLVLVYRTSGWERRQSPGGIRPQPIHRDG-PPPSP 641
P S PP Y G+ P G P H +G PPP P
Sbjct: 8 PESYPPPGYQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQP 49
>At3g52710.1 68416.m05807 expressed protein predicted protein,
Arabidopsis thaliana
Length = 289
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 604 GRIPPGDCRRSQPEVR*TSTRSGGDSEEGV 515
GR+PPGD +S P+ T +R D E V
Sbjct: 238 GRLPPGDVGKSSPQRNSTGSRRSIDGGEPV 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,824,590
Number of Sequences: 28952
Number of extensions: 376196
Number of successful extensions: 1169
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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