Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l24f
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41539-1|AAB52498.1|  246|Caenorhabditis elegans Carbonic anhydr...    68   5e-12
U39743-2|AAA80437.6|  310|Caenorhabditis elegans Carbonic anhydr...    67   8e-12
Z68118-4|CAD18873.1|  235|Caenorhabditis elegans Hypothetical pr...    65   3e-11
Z68118-3|CAA92190.2|  280|Caenorhabditis elegans Hypothetical pr...    65   3e-11
AF000198-1|AAB53054.1|  319|Caenorhabditis elegans Carbonic anhy...    64   1e-10
U23517-10|AAB93341.3|  337|Caenorhabditis elegans Carbonic anhyd...    46   2e-05
U12966-4|AAA20616.1|  365|Caenorhabditis elegans Carbonic anhydr...    44   6e-05
Z69793-7|CAA93676.3|  527|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z69791-7|CAA93663.3|  527|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U88168-1|AAC24403.2|  376|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical ...    29   3.4  
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z69302-6|CAL36504.1|  472|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z75538-2|CAA99840.1|  476|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U41539-1|AAB52498.1|  246|Caenorhabditis elegans Carbonic anhydrase
           protein 3 protein.
          Length = 246

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 46/123 (37%), Positives = 54/123 (43%)
 Frame = +1

Query: 187 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLI 366
           QSPI I L       + D +KF  Y D      ++NNG +   T    S  P + GG L 
Sbjct: 24  QSPINIDLGEVERKDTHDGIKFVNY-DHPIQGDIVNNGHSVQMTPELRSEHPEIYGGGLD 82

Query: 367 GEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGF 546
             Y   Q HFHW  +D  G EH L G  Y AE H VH           V  P  LAVVG 
Sbjct: 83  QVYRLVQYHFHWGENDNEGSEHTLGGLRYPAELHLVH---------QGVEDPGKLAVVGV 133

Query: 547 LLE 555
            L+
Sbjct: 134 FLQ 136


>U39743-2|AAA80437.6|  310|Caenorhabditis elegans Carbonic anhydrase
           protein 5 protein.
          Length = 310

 Score = 67.3 bits (157), Expect = 8e-12
 Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
 Frame = +1

Query: 187 QSPIAISLSRCPT--WSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDA--SVRPTLSG 354
           QSPI I   R P   ++ L  + F  Y D +    L N G T +    ++    +P + G
Sbjct: 49  QSPIDI---RAPDVDYALLHRMHFLNY-DMDGKIELSNTGRTLFAGGFESWQHKQPMIQG 104

Query: 355 GPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLA 534
           G L   Y   Q H HW  +D  G EH +    Y AE H VH      +L+ A+  PDGLA
Sbjct: 105 GGLKHRYKLAQFHLHWGQNDAVGSEHAMGSLHYPAELHLVHVREGL-TLKEALSRPDGLA 163

Query: 535 VVG-FLLETVDAPNPRFDRLVQGL 603
           VVG FL +T D    +F  + + L
Sbjct: 164 VVGVFLAKTNDPVANKFSPISERL 187


>Z68118-4|CAD18873.1|  235|Caenorhabditis elegans Hypothetical
           protein R01E6.3b protein.
          Length = 235

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 28/62 (45%), Positives = 36/62 (58%)
 Frame = +1

Query: 370 EYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFL 549
           ++   Q H HW  +   G EH LDG   + E HFV +N+ YES   A+  PDGLAVVG  
Sbjct: 69  KFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGLAVVGVF 128

Query: 550 LE 555
           L+
Sbjct: 129 LK 130


>Z68118-3|CAA92190.2|  280|Caenorhabditis elegans Hypothetical
           protein R01E6.3a protein.
          Length = 280

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 28/62 (45%), Positives = 36/62 (58%)
 Frame = +1

Query: 370 EYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFL 549
           ++   Q H HW  +   G EH LDG   + E HFV +N+ YES   A+  PDGLAVVG  
Sbjct: 114 KFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGLAVVGVF 173

Query: 550 LE 555
           L+
Sbjct: 174 LK 175


>AF000198-1|AAB53054.1|  319|Caenorhabditis elegans Carbonic
           anhydrase protein 6 protein.
          Length = 319

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 36/144 (25%), Positives = 66/144 (45%)
 Frame = +1

Query: 163 HISRLRPSQSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRP 342
           ++  L  +QSPI I          L    F+  ++S      +N+G++ +      S   
Sbjct: 60  NVPSLGRTQSPIDIVPVITAFGEHLQNAHFEVTYESTGEFKAVNDGNSIWLMREGNSSEL 119

Query: 343 TLSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHP 522
            +S  P   +Y  + ++FHW+ +   G EH + G GYA E H +H N+++ ++  A+  P
Sbjct: 120 AISFLPE-EQYHLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRNTRFATMADALKQP 178

Query: 523 DGLAVVGFLLETVDAPNPRFDRLV 594
           +G+  +   L      N  F  L+
Sbjct: 179 NGVIAIAVFLNESHDDNAVFSPLI 202


>U23517-10|AAB93341.3|  337|Caenorhabditis elegans Carbonic
           anhydrase protein 2 protein.
          Length = 337

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
 Frame = +1

Query: 187 QSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLS--GGP 360
           QSP+ I  S+      L P+  +G   +   A+  N G     T  D   RPT++  GGP
Sbjct: 36  QSPVNIDPSQLLYDPHLMPINIEG---NIVEAVFENTGQLPVVTVKDLPNRPTINITGGP 92

Query: 361 LIG-EYIFEQMHFHWSVDDF--TGCEHVLDGHGYAAECHFVHYNSK-YESLETAVGHPDG 528
            +   Y   Q+  H+   D    G EH +D   + AE   + YNS  Y +   A+  P G
Sbjct: 93  TMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEIQLLAYNSALYPNFSVAMTSPRG 152

Query: 529 LAVVGFLLE 555
           L  V  +++
Sbjct: 153 LLAVSVIVD 161


>U12966-4|AAA20616.1|  365|Caenorhabditis elegans Carbonic anhydrase
           protein 1 protein.
          Length = 365

 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = +1

Query: 289 LNNGSTAYFTFNDASVRPT--LSGGPLIG-EYIFEQMHFHWSVDDFTGCEHVLDGHGYAA 459
           +N G         +S +P+  ++ GPL G  Y  +++ FH    +  G EH ++G  +  
Sbjct: 152 VNTGQMVRVRIGYSSKKPSVNITSGPLYGYRYRVQRIDFHMGRKNENGSEHTINGRRFPM 211

Query: 460 ECHFVHYNSK-YESLETAVGHPDGLAVVGFLLE 555
           E   V YN+  Y +  +A   P G+A++  L++
Sbjct: 212 EVQLVAYNTDLYPNFTSASKSPHGIAILSVLVD 244


>Z69793-7|CAA93676.3|  527|Caenorhabditis elegans Hypothetical
           protein F39D8.4 protein.
          Length = 527

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 404 DQWKCICSKMYSPIR--GPPLRVGLTDASLNVKYAVDPLF 291
           DQW    S MY+P+R  G     GL   S+N  +   PLF
Sbjct: 140 DQWFVNDSAMYNPLRFEGDIANSGLNSRSINTFFGDSPLF 179


>Z69791-7|CAA93663.3|  527|Caenorhabditis elegans Hypothetical
           protein F39D8.4 protein.
          Length = 527

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 404 DQWKCICSKMYSPIR--GPPLRVGLTDASLNVKYAVDPLF 291
           DQW    S MY+P+R  G     GL   S+N  +   PLF
Sbjct: 140 DQWFVNDSAMYNPLRFEGDIANSGLNSRSINTFFGDSPLF 179


>U88168-1|AAC24403.2|  376|Caenorhabditis elegans Hypothetical
           protein K11H12.9 protein.
          Length = 376

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 94  NRTVKIDPKFLSAQPKKTSSDAEHISRLR-PSQSPIAISLSRCPTWSSLDPLKFKG 258
           N  +   P  L   P KTS D   ISR    S S  + S S+  +WS  D +   G
Sbjct: 37  NDDISSIPDSLEHSPAKTSDDGSEISRANFSSPSSPSRSPSKKVSWSLFDQVSLSG 92


>AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical
           protein ZK973.2 protein.
          Length = 865

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 599 PCTSLSNLGLGASTVSRRNPTTANPSGWPTAVSKDS 492
           PC+ ++   +   T  ++NP T NP G   AVS+ S
Sbjct: 797 PCSFMTCQLIVYKTSEKKNPVTNNPCGGQNAVSRPS 832


>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein
            F54D11.2 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 27/118 (22%), Positives = 46/118 (38%)
 Frame = +1

Query: 238  DPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLIGEYIFEQMHFHWSVDDF 417
            D ++ K  +  N N +L+  G++ Y     A++   +S    IG  +   +    + DD 
Sbjct: 819  DKVRQKNKYRPNCNVVLVGYGASTYLIHRAANLVEGISAIISIGFPVMTSLGRRGTADDE 878

Query: 418  TGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVDAPNPRFDRL 591
                +        AE    + N     L T++  P GL VVG   + +  P     RL
Sbjct: 879  ILLTYCPTLFIVGAEGRRFN-NEAITELRTSMISPSGLVVVGHSNDMILVPTSMLLRL 935


>Z69302-6|CAL36504.1|  472|Caenorhabditis elegans Hypothetical
           protein F40F8.11 protein.
          Length = 472

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -3

Query: 464 HSAAYPWPSSTCSHPVKSSTDQW--KCICSKMYSPI 363
           +S +YPW ++  SH   S  D W       + Y+P+
Sbjct: 3   YSGSYPWNNNYYSHGQSSGNDSWAPSAQSQEQYNPV 38


>AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical
           protein C49G7.11 protein.
          Length = 186

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +1

Query: 358 PLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAV 537
           P+IGE +  Q+     +        VL  HG  AE    HY  K +  E    + D   V
Sbjct: 85  PVIGELLKTQVKSGGLIGAICAGPTVLLAHGIVAERVTCHYTVKDKMTEGGYKYLDDNVV 144

Query: 538 VGFLLETVDAPNPRFD---RLVQGLE 606
           +   + T   P   F+   ++V+ LE
Sbjct: 145 ISDRVITSKGPGTAFEFALKIVETLE 170


>Z75538-2|CAA99840.1|  476|Caenorhabditis elegans Hypothetical
           protein F20G4.2 protein.
          Length = 476

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 235 AKTKSDTGSMI*QSVIVKVLILKCARHQKKFS 140
           ++ K+ T SM    +I  V+ LK ARH  KFS
Sbjct: 103 SEIKTPTSSMAKIRIITPVIPLKIARHPTKFS 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,331,008
Number of Sequences: 27780
Number of extensions: 314708
Number of successful extensions: 1107
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)