Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l19r
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical... 275 2e-74
U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate... 273 1e-73
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 30 1.9
U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97011-5|AAO12451.1| 168|Caenorhabditis elegans Hypothetical pr... 29 4.5
U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical pr... 29 4.5
U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.5
U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical pr... 29 4.5
U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical pr... 29 4.5
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 28 5.9
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical
protein Y17G7B.7 protein.
Length = 247
Score = 275 bits (675), Expect = 2e-74
Identities = 132/189 (69%), Positives = 156/189 (82%)
Frame = -2
Query: 719 VEVAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALE 540
V VAAQNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HALE
Sbjct: 58 VLVAAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALE 117
Query: 539 SGLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTAT 360
+G+KV+ CIGE LEERE+G T++V FRQL+A+V G WENIV+AYEPVWAIGTGKTA+
Sbjct: 118 AGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTAS 176
Query: 359 PQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLK 180
+QAQ+VH +R +L VS +V+DA RI YGGSVTA NA EL DIDGFLVGGASLK
Sbjct: 177 GEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLK 236
Query: 179 PEFVEIVNA 153
P+FV+I+NA
Sbjct: 237 PDFVKIINA 245
>U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate
isomerase protein.
Length = 247
Score = 273 bits (669), Expect = 1e-73
Identities = 130/189 (68%), Positives = 156/189 (82%)
Frame = -2
Query: 719 VEVAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALE 540
V VAAQNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HALE
Sbjct: 58 VLVAAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALE 117
Query: 539 SGLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTAT 360
+G+KV+ CIGE LEERE+G T++V FRQL+A+V G WENIV+AYEPVWAIGTGKTA+
Sbjct: 118 AGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTAS 176
Query: 359 PQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLK 180
+QAQ+VH +R +L VS +V+DA RI YGGSVTA NA ++ DIDGFLVGGASLK
Sbjct: 177 GEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAADVGKKPDIDGFLVGGASLK 236
Query: 179 PEFVEIVNA 153
P+FV+I+NA
Sbjct: 237 PDFVKIINA 245
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -2
Query: 419 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 246
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 245 NAKELASCK 219
+ CK
Sbjct: 500 LFERWPPCK 508
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -2
Query: 419 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 246
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 245 NAKELASCK 219
+ CK
Sbjct: 500 LFERWPPCK 508
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -2
Query: 392 VWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGS 258
V+++ TG+ T AQ HH + ++++VS S SDA+R+ G S
Sbjct: 2612 VYSVKTGEIRTLSDAQHHHHHPTHSMTSSVSTS-SDALRMVRGSS 2655
>U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical
protein C27A2.4 protein.
Length = 678
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 615 KYNPIYSNVFDHSG*NFTSKSSFWRLPTVLGC 710
K N ++S + +H+G + +FWR+P L C
Sbjct: 171 KVNSLFSKLSEHTG-EVINADNFWRIPDTLRC 201
>U97011-5|AAO12451.1| 168|Caenorhabditis elegans Hypothetical
protein F31F7.1b protein.
Length = 168
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 474 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 638
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 639 VFDHSG*NFTSKSSFWRL 692
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical
protein F31F7.1c protein.
Length = 273
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 474 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 638
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 639 VFDHSG*NFTSKSSFWRL 692
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical
protein F31F7.1a protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 474 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 638
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 639 VFDHSG*NFTSKSSFWRL 692
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical
protein C05D10.1c protein.
Length = 457
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 270 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 389
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 191 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 230
>U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical
protein C05D10.1b protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 270 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 389
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 159 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 198
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 270 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 389
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 263 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 302
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 502 SKRENLARLRKLFLDN*KL*YRPLVTNGK-ILCLPMNLYGLLV 377
+K+ N+ +L + LDN + + P + + ILC +NLYG L+
Sbjct: 112 AKQSNIEKLINIVLDNRSVGFPPSSDSPQFILCRELNLYGNLL 154
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
protein F54F12.1 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -2
Query: 491 ESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLS 312
+S ++ + + LKAL IG + L+Y+ + + +GK + Q V+H NW+
Sbjct: 181 QSIQSSQSLLPVLKALRKVIGSHVNGLELSYKYIAGLPSGKLDLEELIQAVYH---NWIK 237
Query: 311 ANV 303
+
Sbjct: 238 NRI 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,650,207
Number of Sequences: 27780
Number of extensions: 365184
Number of successful extensions: 1059
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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