Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l19r
(726 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21170.1 68415.m02511 triosephosphate isomerase, chloroplast,... 250 9e-67
At3g55440.1 68416.m06157 triosephosphate isomerase, cytosolic, p... 245 2e-65
At5g55820.1 68418.m06956 expressed protein 31 0.59
At1g31460.1 68414.m03852 expressed protein 30 1.8
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 29 2.4
At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar... 29 2.4
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 29 4.1
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 28 5.5
At1g64900.1 68414.m07357 cytochrome P450, putative similar to cy... 28 5.5
At5g57390.1 68418.m07170 ovule development protein, putative sim... 28 7.2
At5g51380.1 68418.m06370 F-box family protein contains Pfam PF00... 28 7.2
At4g15380.1 68417.m02350 cytochrome P450 family protein similar ... 28 7.2
At2g12190.1 68415.m01316 cytochrome P450, putative 28 7.2
At1g64950.1 68414.m07362 cytochrome P450, putative similar to cy... 28 7.2
At1g64940.1 68414.m07361 cytochrome P450, putative similar to cy... 28 7.2
At3g24710.1 68416.m03102 hypothetical protein 27 9.6
>At2g21170.1 68415.m02511 triosephosphate isomerase, chloroplast,
putative similar to Triosephosphate isomerase,
chloroplast precursor: SP|P48496 from Spinacia oleracea,
SP|P46225 from Secale cereale
Length = 315
Score = 250 bits (611), Expect = 9e-67
Identities = 120/192 (62%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Frame = -2
Query: 725 DNVEVAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHA 546
D ++++ QN W GAFTGEIS +KD+G WVILGHSERR + GEKDE + +K A+A
Sbjct: 117 DRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYA 176
Query: 545 LESGLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKT 366
L GL VIACIGE LEERE+GKT +V F QLKA A+ W+NIV+AYEPVWAIGTGK
Sbjct: 177 LSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAV-PSWDNIVVAYEPVWAIGTGKV 235
Query: 365 ATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGAS 186
A+PQQAQ+VH A+R WL NVS V+ RI YGGSV N+ ELA +DIDGFLVGGAS
Sbjct: 236 ASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGAS 295
Query: 185 LK-PEFVEIVNA 153
LK PEF IVN+
Sbjct: 296 LKGPEFATIVNS 307
>At3g55440.1 68416.m06157 triosephosphate isomerase, cytosolic,
putative strong similarity to triosephosphate isomerase,
cytosolic from Petunia hybrida [SP|P48495], from Coptis
japonica [SP|P21820]
Length = 254
Score = 245 bits (600), Expect = 2e-65
Identities = 114/187 (60%), Positives = 137/187 (73%)
Frame = -2
Query: 713 VAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESG 534
VAAQNCW GAFTGE+S M+ ++ + WVILGHSERR I E E V +KVA+AL G
Sbjct: 62 VAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQG 121
Query: 533 LKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQ 354
LKVIAC+GETLEERE+G T +VV Q KA+ + + W N+V+AYEPVWAIGTGK A+P
Sbjct: 122 LKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTN-WSNVVIAYEPVWAIGTGKVASPA 180
Query: 353 QAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLKPE 174
QAQ+VH LR WL+ NVS V+ RI YGGSV N KEL D+DGFLVGGASLKPE
Sbjct: 181 QAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQADVDGFLVGGASLKPE 240
Query: 173 FVEIVNA 153
F++I+ A
Sbjct: 241 FIDIIKA 247
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 31.5 bits (68), Expect = 0.59
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 465 NNFLSLARFSLFESLTNTGNDFQARFKGMSNLFSNKFIFFTKNCSSFRMTKYNPIYSNVF 644
+ +S AR SL E + ND++A G ++ ++K + + S R T P++ + F
Sbjct: 737 HGIISRARSSLIEE--ESANDYKALSDGSNHKSADKQLEVREGNSLLR-TPDRPVFVDNF 793
Query: 645 DHSG*NFTSKSSFWRLPT 698
D N KSS ++PT
Sbjct: 794 DEVPENSREKSSMEKVPT 811
>At1g31460.1 68414.m03852 expressed protein
Length = 301
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 424 LSPMADTKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKP 537
LS + A NC T S LPD L SR ++++ P
Sbjct: 25 LSDLEQVAAINCSGFTDSTLPDDLESRFRRLKSLPAAP 62
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +3
Query: 138 IILLISIYNFYKLRLKTGSTN*ETINVFAGCKLLSISSCDRATVLNTYSVRYTPTHIGRQ 317
++ +YN +LRL S + I++ + K+L++S A+ L + S+++T ++
Sbjct: 295 LLAAAEMYNLSRLRLLCESHICKGISISSVSKILALSDKYNASELKSVSLKFTAENLAAV 354
Query: 318 PVTKSMVDI 344
TK+ D+
Sbjct: 355 LQTKAYEDL 363
>At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar to
RNA helicase (RH25) [Arabidopsis thaliana] GI:3776023;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 798
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +3
Query: 318 PVTKSMVDILSLLGSSSLACTNSPYRFIGKHNIFPFVTNGRY*SF*LSKNNFLSLARFSL 497
PV KS D S GS S+ T++ + + + G+ F S+ F S++RF
Sbjct: 125 PVKKS--DQGSRSGSDSIDSTSNSPIDVRRLVSATCDSMGKNRVFGSSRRGFSSMSRFKR 182
Query: 498 FESLTNTGNDFQARFKGMSNLFSNKF 575
ES + G+DF A+ + FS KF
Sbjct: 183 NESSCDEGDDFDAKKLDTLSPFSPKF 208
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 392 QVHRQAQYFPICHQWPILKLLIV*KQLPQSCQILSLRESHQYRQ*LSSQIQGHEQPFQQQ 571
Q+H+Q Q Q + + +Q+PQ Q + Q +Q SQ+Q H+Q QQQ
Sbjct: 688 QLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQHHQQQQQQQ 747
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -2
Query: 305 VSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASL---KPEFVEIVNANQ*NNA 135
+ GS+ D ++IQYG S TA ++ + + F VG KPE V +++ + NN
Sbjct: 204 LQGSLWDELQIQYGESQTAIEL-DVPEIETL--FSVGAKPRPKPKPEKVPLIDLKRANNT 260
Query: 134 LIIKKML 114
++ K+L
Sbjct: 261 IVNLKIL 267
>At1g64900.1 68414.m07357 cytochrome P450, putative similar to
cytochrome p450 GI:438240 from [Solanum melongena]
Length = 506
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -2
Query: 695 WKSPKGAFTGEI-SPAMIKDVGV--NWVILGHSERRTIFGEKDELVAEKVAHALESGLKV 525
W+ + T EI P+ ++ +WV+ ER G ++ +V H L V
Sbjct: 125 WRLLRRNITSEILHPSRVRSYSHARHWVLEILFERFRNHGGEEPIVLIHHLHYAMFALLV 184
Query: 524 IACIGETLEERESGKTEEVVFRQLKAL 444
+ C G+ L+E++ + E + QL +L
Sbjct: 185 LMCFGDKLDEKQIKEVEFIQRLQLLSL 211
>At5g57390.1 68418.m07170 ovule development protein, putative
similar to ovule development protein AINTEGUMENTA
(GI:1209099)[Arabidopsis thaliana]
Length = 555
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -2
Query: 428 DKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDA 282
D + N A PV AI T T + + NW++ N+S S A
Sbjct: 492 DGYNNHSAASNPVSAIPLSSTTTMSNGNEGYGGNINWINNNISSSYQTA 540
>At5g51380.1 68418.m06370 F-box family protein contains Pfam
PF00646: F-box domain; similar to F-box protein FBL2
(GI:6063090) [Homo sapiens]
Length = 479
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 391 TGS*ASTIFSHLSPMADTKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKPDSR 546
T S ++ H + + +C S + +LSS S ++ +T++PD+R
Sbjct: 405 TTSGLESVILHWEELESMRVVSCKNIKDSEISAALSSLFSLLKELTWRPDTR 456
>At4g15380.1 68417.m02350 cytochrome P450 family protein similar to
CYTOCHROME P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max]
Length = 517
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 628 FTPTS-LIIAGEISPVKAPFGDFQQF 702
FTPT + AG S + AP+GD+ +F
Sbjct: 112 FTPTDDSLFAGSFSFISAPYGDYWKF 137
>At2g12190.1 68415.m01316 cytochrome P450, putative
Length = 512
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -2
Query: 587 GEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQL 453
GE+ +V + + +A+ + L V+ C G+ L+E++ + E V RQL
Sbjct: 168 GEEPIVVVDHLHYAMFA-LLVLMCFGDKLDEKQIKQVEYVQRRQL 211
>At1g64950.1 68414.m07362 cytochrome P450, putative similar to
cytochrome P450 89A2 (CYPLXXXIX) (SP:Q42602)
[Arabidopsis thaliana];similar to cytochrome P450
(GI:438242) [Solanum melongena]
Length = 510
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -2
Query: 587 GEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQL 453
GE+ +V + + +A+ + L V+ C G+ L+E++ + E V RQL
Sbjct: 168 GEEPIVVVDHLHYAMFA-LLVLMCFGDKLDEKQIKQVEYVQRRQL 211
>At1g64940.1 68414.m07361 cytochrome P450, putative similar to
cytochrome p450 GI:438242 from [Solanum melongena]
Length = 511
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -2
Query: 587 GEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQL 453
GE+ +V + + +A+ + L V+ C G+ L+E++ + E V RQL
Sbjct: 169 GEEPIVVVDHLHYAMFA-LLVLMCFGDKLDEKQIKQVEYVQRRQL 212
>At3g24710.1 68416.m03102 hypothetical protein
Length = 126
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 578 DELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQLKALVSA 435
D V + E V++ +GE + E E+G ++EV R+LKAL A
Sbjct: 11 DGAVVYVAGSSTEMPSDVMSALGEIVSE-ETGGSKEVASRRLKALEKA 57
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,899
Number of Sequences: 28952
Number of extensions: 333479
Number of successful extensions: 854
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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