Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l18r
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   2.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = +2

Query: 89  VHLELICYA---LCFFTIQYIFIIFSSH 163
           +HL   C     LC +   Y FI+F+ H
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFILFTVH 251



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/56 (21%), Positives = 24/56 (42%)
 Frame = +2

Query: 68  FWIFATIVHLELICYALCFFTIQYIFIIFSSHKYDPFVT*FCIVDHG*TFWCIFFV 235
           ++ F  ++ +    YA   FT+  +F++   +   P     CI      F+C F +
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIY----YFYCAFII 155



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 89  VHLELICYALCFFTIQYIFIIFSSHKYDPFVT*FCI 196
           +HL L C A   FT+  +F++   + Y   +   CI
Sbjct: 264 MHL-LFCCAFIIFTMHLLFLLCIYYFYCALIILLCI 298



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 68  FWIFATIVHLELICYALCFFTIQYIFIIFSSH 163
           ++  A I+    + + LC +     FIIF+ H
Sbjct: 148 YFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMH 179



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 116 LCFFTIQYIFIIFSSHKYDPF 178
           LC +     FIIF +H Y  F
Sbjct: 296 LCIYYFCRAFIIFPTHFYCAF 316


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 560 PSINRCKFLFCFIFLSL 610
           P +NRCK L C  F +L
Sbjct: 11  PGVNRCKLLSCKDFDTL 27


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -3

Query: 427 EEYHQNKEVISATIPVDVYSNIKETMNHFPVFLFPLPRSQGYEFIMCQMYGH 272
           EE+   +      IP      +K T+    VF+F L  S    F + Q+YGH
Sbjct: 264 EEHDTRRASSRGIIPRAKIKTVKMTL--VIVFVFVLCWSPYIVFDLLQVYGH 313


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/33 (24%), Positives = 21/33 (63%)
 Frame = -3

Query: 574 SVDTRQFSSVLNPKQALGKEINVPDKKLEDIFK 476
           S+ T++++ + N  Q + +++   D+K  ++FK
Sbjct: 99  SLKTKEWAKLNNKFQYIDEKLKTRDQKERNLFK 131


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 101 LICYALCFFTIQYIFIIFSSHK 166
           + CY +  FT+ YI+  +S H+
Sbjct: 146 VFCYFIYLFTVYYIY--YSVHE 165



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 353 CLFNI*VNVYRNSCRYD 403
           CLF I +N+ +N   Y+
Sbjct: 34  CLFPITINIRKNGLNYN 50


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 274 VHTSGT**THSPVSVEEETGTLG 342
           VH SGT   HS    +   GT G
Sbjct: 169 VHNSGTHFWHSHSGFQRSDGTFG 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,601
Number of Sequences: 336
Number of extensions: 4212
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)