Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l18r
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF005855-1|AAB81486.1|  274|Drosophila melanogaster anon2A5 prot...   272   2e-73
AY060880-1|AAL28428.1|  254|Drosophila melanogaster GM04207p pro...   272   4e-73
AE014297-2240|AAF55341.3|  278|Drosophila melanogaster CG10340-P...   271   5e-73
AE014297-3079|AAF55943.2|  841|Drosophila melanogaster CG6455-PA...    29   6.2  

>AF005855-1|AAB81486.1|  274|Drosophila melanogaster anon2A5
           protein.
          Length = 274

 Score =  272 bits (668), Expect = 2e-73
 Identities = 128/233 (54%), Positives = 162/233 (69%), Gaps = 2/233 (0%)
 Frame = -3

Query: 697 PYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXKFASVDTRQFSSVLNPKQALGK 518
           PYY KYA++IA+LQ TS EEF++RVE+                  R +S +LNPKQ L  
Sbjct: 39  PYYSKYASKIAKLQQTSAEEFLDRVERVVNPIKD------GQSQARSYSELLNPKQKLQA 92

Query: 517 E--INVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNH 344
           E    +P KKL DI K+EL+ DK++ E+  IW EYH+ KEV++AT+    Y N+      
Sbjct: 93  EQAAELPHKKLTDIMKLELIEDKTAEEVSQIWLEYHKTKEVLAATLSTSQYENLMARAKE 152

Query: 343 FPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTELSDKGIIL 164
            PVFL PLPRS+G+EF+M Q   +TVHFTPLLAYQVH ENAPECLT+VHYTE+ DKG++L
Sbjct: 153 HPVFLLPLPRSEGFEFVMLQFAANTVHFTPLLAYQVHHENAPECLTVVHYTEVQDKGVVL 212

Query: 163 MRGEYDKNVLNGKEAQCIANQFQMYYSGKDPERLKLLESFTKSPDTFKHMDLI 5
           MRGEYD  VL  +EAQC+AN+ QM+Y   D  RL+LL +FT+ PD FKHMDLI
Sbjct: 213 MRGEYDTKVLTAQEAQCLANELQMFYLKPDEGRLRLLNTFTRKPDEFKHMDLI 265


>AY060880-1|AAL28428.1|  254|Drosophila melanogaster GM04207p
           protein.
          Length = 254

 Score =  272 bits (666), Expect = 4e-73
 Identities = 127/233 (54%), Positives = 162/233 (69%), Gaps = 2/233 (0%)
 Frame = -3

Query: 697 PYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXKFASVDTRQFSSVLNPKQALGK 518
           PYY KYA++IA+LQ TS EEF++RVE+                  R +S +LNPKQ L  
Sbjct: 19  PYYSKYASKIAKLQQTSAEEFLDRVERVVNPIKD------GQSQARSYSELLNPKQKLQA 72

Query: 517 E--INVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNH 344
           E    +P KKL DI K+EL+ DK++ E+  IW EYH+ KEV++AT+    Y N+      
Sbjct: 73  EQAAELPHKKLTDIMKLELIEDKTAEEVSQIWLEYHKTKEVLAATLSTSQYENLMARAKE 132

Query: 343 FPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTELSDKGIIL 164
            PVFL PLPRS+G+EF+M Q   +TVHFTPLLAYQVH ENAPECLT+VHYTE+ DKG++L
Sbjct: 133 HPVFLLPLPRSEGFEFVMLQFAANTVHFTPLLAYQVHHENAPECLTLVHYTEVQDKGVVL 192

Query: 163 MRGEYDKNVLNGKEAQCIANQFQMYYSGKDPERLKLLESFTKSPDTFKHMDLI 5
           MRGEYD  VL  +EAQC+AN+ QM+Y   D  +L+LL +FT+ PD FKHMDLI
Sbjct: 193 MRGEYDTKVLTAQEAQCLANELQMFYLKPDEGKLRLLNTFTRKPDEFKHMDLI 245


>AE014297-2240|AAF55341.3|  278|Drosophila melanogaster CG10340-PA
           protein.
          Length = 278

 Score =  271 bits (665), Expect = 5e-73
 Identities = 127/233 (54%), Positives = 162/233 (69%), Gaps = 2/233 (0%)
 Frame = -3

Query: 697 PYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXKFASVDTRQFSSVLNPKQALGK 518
           PYY KYA++IA+LQ TS EEF++RVE+                  R +S +LNPKQ L  
Sbjct: 43  PYYSKYASKIAKLQQTSAEEFLDRVERVVNPIKD------GQSQARSYSELLNPKQKLQA 96

Query: 517 E--INVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNH 344
           E    +P KKL DI K+EL+ DK++ E+  IW EYH+ KEV++AT+    Y N+      
Sbjct: 97  EQAAELPHKKLTDIMKLELIEDKTAEEVSQIWLEYHKTKEVLAATLSTSQYENLMARAKE 156

Query: 343 FPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTELSDKGIIL 164
            PVFL PLPRS+G+EF+M Q   +TVHFTPLLAYQVH ENAPECLT+VHYTE+ DKG++L
Sbjct: 157 HPVFLLPLPRSEGFEFVMLQFAANTVHFTPLLAYQVHHENAPECLTVVHYTEVQDKGVVL 216

Query: 163 MRGEYDKNVLNGKEAQCIANQFQMYYSGKDPERLKLLESFTKSPDTFKHMDLI 5
           MRGEYD  VL  +EAQC+AN+ QM+Y   D  +L+LL +FT+ PD FKHMDLI
Sbjct: 217 MRGEYDTKVLTAQEAQCLANELQMFYLKPDEGKLRLLNTFTRKPDEFKHMDLI 269


>AE014297-3079|AAF55943.2|  841|Drosophila melanogaster CG6455-PA,
           isoform A protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 317 WKRKQEHWEMIH 352
           WKRKQ+HW  IH
Sbjct: 46  WKRKQQHWPAIH 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,537,188
Number of Sequences: 53049
Number of extensions: 663762
Number of successful extensions: 1738
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)