Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l18f
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071731-1|AAH71731.1| 328|Homo sapiens ATP synthase mitochondr... 61 3e-09
BC018781-1|AAH18781.1| 328|Homo sapiens ATP synthase mitochondr... 61 3e-09
BC008498-1|AAH08498.1| 328|Homo sapiens ATP synthase mitochondr... 61 3e-09
AL593856-2|CAI16978.1| 328|Homo sapiens ATP synthase mitochondr... 61 3e-09
AL136373-1|CAI14761.1| 328|Homo sapiens ATP synthase mitochondr... 61 3e-09
AK026004-1|BAB15316.1| 328|Homo sapiens protein ( Homo sapiens ... 61 3e-09
>BC071731-1|AAH71731.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 61.3 bits (142), Expect = 3e-09
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +1
Query: 232 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 411
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 412 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 579
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
>BC018781-1|AAH18781.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 61.3 bits (142), Expect = 3e-09
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +1
Query: 232 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 411
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 412 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 579
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
>BC008498-1|AAH08498.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 61.3 bits (142), Expect = 3e-09
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +1
Query: 232 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 411
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 412 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 579
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
>AL593856-2|CAI16978.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 61.3 bits (142), Expect = 3e-09
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +1
Query: 232 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 411
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 412 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 579
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
>AL136373-1|CAI14761.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 61.3 bits (142), Expect = 3e-09
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +1
Query: 232 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 411
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 412 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 579
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
>AK026004-1|BAB15316.1| 328|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22351 fis, clone HRC06325. ).
Length = 328
Score = 61.3 bits (142), Expect = 3e-09
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +1
Query: 232 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 411
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 412 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 579
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,038,622
Number of Sequences: 237096
Number of extensions: 1600618
Number of successful extensions: 10683
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10677
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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