Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l18f
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55369-2|AAK52183.2|  526|Caenorhabditis elegans Udp-glucuronosy...    31   0.48 
AF100663-2|AAC68981.2|  532|Caenorhabditis elegans Udp-glucurono...    30   1.5  
Z92812-6|CAB07280.1|  372|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U41270-5|AAA82442.2|  364|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U41038-5|AAK29710.4|  519|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U55369-2|AAK52183.2|  526|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein48 protein.
          Length = 526

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1

Query: 214 EKALENLKTNPYYEKYANRIAELQNTSPEEFMERV 318
           E A++ +  NP Y++ ANR+ +L  + P+   ER+
Sbjct: 427 EGAIKEILVNPTYQEKANRLKKLMRSKPQSASERL 461


>AF100663-2|AAC68981.2|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein19 protein.
          Length = 532

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
 Frame = +1

Query: 214 EKALENLKTNPYYEKYANRIAEL---QNTSPEE-FMERVE 321
           +  +E +  NP Y K A R+AE+   Q T+P+E F++ VE
Sbjct: 426 QSTIEEVLNNPEYRKSAERVAEMLRNQPTNPKETFLKYVE 465


>Z92812-6|CAB07280.1|  372|Caenorhabditis elegans Hypothetical
           protein T03E6.6 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 261 IFLIVGISFQILKCLLHSHR 202
           IF +VG++  +L CL+ SHR
Sbjct: 57  IFCVVGLNINLLNCLVISHR 76


>U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical
           protein F46F11.9b protein.
          Length = 1282

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +1

Query: 367 SVDTRQFSSVLNPKQALGKEINVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNK 534
           S+ T +  +++N         N P + L DI K+E+   K+    + +W E  +N+
Sbjct: 594 SLQTERLRTIVNALDIYFPHRNEPVEMLTDIPKVEMETVKAIYGERPLWNEIDENE 649


>U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical
           protein F46F11.9a protein.
          Length = 1280

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +1

Query: 367 SVDTRQFSSVLNPKQALGKEINVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNK 534
           S+ T +  +++N         N P + L DI K+E+   K+    + +W E  +N+
Sbjct: 592 SLQTERLRTIVNALDIYFPHRNEPVEMLTDIPKVEMETVKAIYGERPLWNEIDENE 647


>U41270-5|AAA82442.2|  364|Caenorhabditis elegans Hypothetical
           protein AH9.4 protein.
          Length = 364

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 357 LFCFIFLSLVTLFDSFHEFLWRCIL*LCYSVSIFLIVGIS-FQILKCLLHSHRSCSKTAS 181
           ++C+ FLS++     FH F +R I     +   FL   +  FQI   +  ++R   K+  
Sbjct: 101 VWCWFFLSVLRYIAVFHPFKYRTIWRQPRNALKFLAGAVGMFQIYTLIFVTYRQEEKSCG 160

Query: 180 SY 175
            Y
Sbjct: 161 EY 162


>U41038-5|AAK29710.4|  519|Caenorhabditis elegans Hypothetical
           protein F59C12.3 protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 8/37 (21%), Positives = 21/37 (56%)
 Frame = +1

Query: 439 DKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISA 549
           +KK E++  +    D+   ++  +WEE H+  +++ +
Sbjct: 278 EKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVES 314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,233,402
Number of Sequences: 27780
Number of extensions: 270122
Number of successful extensions: 768
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)