Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l16r
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    30   0.073
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    27   0.39 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   6.3  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   6.3  
AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase ...    23   8.3  

>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 29.9 bits (64), Expect = 0.073
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -2

Query: 603 RGPEFRNLQTKNENWSEELRTSLGSTITPASWCLPTSKFLIALLYL 466
           R P   +L T N    + L  S   T+ P + C+PT    I++LYL
Sbjct: 312 RFPIADHLNTTNHAIVQTLVNSYNPTLAPKACCVPTQLSSISMLYL 357


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = -1

Query: 499 NEQISDRP-----TIPILPDITVGNYIPPEWPQSASYWLTLSPDSIYDTLTYLQKRYNDP 335
           N Q+  +P     T P+  ++T+  + P ++ Q+ + WL     +++D     +  +   
Sbjct: 252 NSQVVTKPEYQLLTAPLFRNVTIAAWDPGKFDQTLAEWLATPDFNLFDNFKKFRSSHPQS 311

Query: 334 IFYITE 317
            F+I +
Sbjct: 312 NFHIID 317


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 603 RGPEFRNLQTKNENWSEELRTSLGSTIT 520
           RGP  + ++ +N+ WS  + T+LG  ++
Sbjct: 543 RGPLGQYIEVRNKKWSGIVETALGGCLS 570


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 469 PILPDITVGNYIPPEWPQSASYWLTLSPD 383
           P+     +  Y  P+W Q+   WL  SP+
Sbjct: 666 PLQMATVLDKYFFPKWLQTLVIWLNQSPN 694


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 170 EVIHQTPGHVTFEPNSG 220
           E +HQTP H+    N+G
Sbjct: 176 EQVHQTPQHMAMYTNAG 192


>AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase
           protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 632 G*KKCKRRLPVVQNSGIY 579
           G K C+ RLP+V +S +Y
Sbjct: 230 GEKPCQARLPIVYSSVMY 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,109
Number of Sequences: 2352
Number of extensions: 15540
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)